R interface for FDA Adverse Event Reporting System
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Updated
Apr 10, 2026 - R
R interface for FDA Adverse Event Reporting System
Co-occurrence analysis in pubmed and faers of two lists of terms.
OpenSource FAERS Database Cleansing, Merging and Analysis using postgresql
Code and Datasets for the paper "Towards early detection of adverse drug reactions: combining pre-clinical drug structures and post-market safety reports", published on BMC Medical Informatics and Decision Making in 2019.
Code and Datasets for the paper "A Computational Framework for Identifying Age Risks in Drug-Adverse Event Pairs", published on AMIA 2022 Informatics Summit.
Drug Side Effect Checker - The Pharmacovigilance Dashboard Prototype build with FDA (FAERS) data
教學用 FAERS ADR 嫌疑藥排序工具:反向查詢 + ROR/PRR 不相稱性 + 時序加權 + Naranjo/WHO-UMC 因果評分。非臨床決策工具。
Step1-Step6 preprocessing workflow and final FAERS compound-PT-SOC core graph releases with standardized compounds, MedDRA PT/SOC mapping, and three pruned graph versions.
MCP server for FDA data: drug approvals, recalls, adverse events, 510(k) device clearances. Wraps openFDA.
Open-source pharmacovigilance engine for FDA adverse event signal detection. Provides validated statistical primitives (PRR, ROR, IC), MedDRA mapping, and reproducibility tools for drug safety research.
Automated pharmacovigilance literature validation for ultra‑rare neurological diseases. Enter a drug name and an adverse event. The app searches PubMed with a multi‑tier cascade, extracts the most relevant evidence, and returns a verdict — Present or Absent — backed by a fine‑tuned PubMedBERT model.
Public reproducibility package for OAB–AF analyses using FAERS/JADER (figures, scripts, derived inputs).
Honest evaluation of emergent 3-drug interaction prediction from FAERS using GNNs
Reproducible OpenFDA FAERS cross-check for a visible 2025 VigiAccess propranolol reporting spike
Local drug safety signal detection using OpenSearch + Qwen3.5. PRR/ROR/EBGM + Mantel-Haenszel. No API keys, no cloud, no licenses.
Code and public poster materials for a CHEST 2024 abstract on hypercapnic respiratory failure adverse-event reporting in clinical trials
openFDA APIs.json profile
Workspace-scale adverse-event horizon scanner — BOCPD + Poisson z-score + CUSUM ensemble with Benjamini–Hochberg FDR control. Workspace-scope A2A agent, signed FHIR DetectedIssue output.
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