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[2/3] Add assign_stitch_groups (tile-cut stitching algorithm)#1193

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timtreis merged 19 commits into
scverse:mainfrom
timtreis:feature/tiling-stitch-algo
Jun 11, 2026
Merged

[2/3] Add assign_stitch_groups (tile-cut stitching algorithm)#1193
timtreis merged 19 commits into
scverse:mainfrom
timtreis:feature/tiling-stitch-algo

Merge branch 'main' into feature/tiling-stitch-algo

98566ee
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Codecov / codecov/project succeeded Jun 11, 2026 in 1s

75.29% (target 1.00%)

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75.29% (target 1.00%)

Details

Codecov Report

❌ Patch coverage is 73.83367% with 129 lines in your changes missing coverage. Please review.
✅ Project coverage is 75.29%. Comparing base (a9966fd) to head (98566ee).

Files with missing lines Patch % Lines
src/squidpy/experimental/tl/_tiling_stitch.py 75.29% 65 Missing and 39 partials ⚠️
src/squidpy/experimental/utils/_params.py 41.17% 9 Missing and 1 partial ⚠️
src/squidpy/experimental/utils/_labels.py 68.00% 6 Missing and 2 partials ⚠️
src/squidpy/experimental/tl/_tiling_qc.py 75.00% 2 Missing and 3 partials ⚠️
src/squidpy/experimental/utils/_geometry.py 80.00% 1 Missing and 1 partial ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main    #1193      +/-   ##
==========================================
- Coverage   75.32%   75.29%   -0.03%     
==========================================
  Files          56       59       +3     
  Lines        7936     8429     +493     
  Branches     1295     1395     +100     
==========================================
+ Hits         5978     6347     +369     
- Misses       1447     1527      +80     
- Partials      511      555      +44     
Files with missing lines Coverage Δ
src/squidpy/experimental/im/_tiling.py 86.06% <ø> (ø)
src/squidpy/experimental/utils/_geometry.py 80.00% <80.00%> (ø)
src/squidpy/experimental/tl/_tiling_qc.py 71.33% <75.00%> (+1.30%) ⬆️
src/squidpy/experimental/utils/_labels.py 73.68% <68.00%> (+4.45%) ⬆️
src/squidpy/experimental/utils/_params.py 41.17% <41.17%> (ø)
src/squidpy/experimental/tl/_tiling_stitch.py 75.29% <75.29%> (ø)
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