Repositories list

• neuroklea

  Public
  Knowledge vaLidated Expert AI assistant for neuroscience

  raghuggingfaceai-assistant+ 4

  raghuggingfaceai-assistantlangchainollamalanggraphagentic-workflow

  Python

  •

  GNU General Public License v3.0

  •55 forks•66 stars•4747 issues•00 pull requests•Updated Aug 27, 2026Aug 27, 2026

• Documentation

  Public
  Source repository for NeuroML documentation.

  neurosciencecomputational-neurosciencecomputational-modelling+ 1

  neurosciencecomputational-neurosciencecomputational-modellingstandardisation

  Jupyter Notebook

  •1111 forks•1818 stars•2929 issues•22 pull requests•Updated Aug 27, 2026Aug 27, 2026

• NeuroMLlite

  Public
  Work towards creating a common JSON based format for compact network specification

  Python

  •

  GNU Lesser General Public License v3.0

  •1212 forks•1414 stars•33 issues•11 pull request•Updated Aug 17, 2026Aug 17, 2026

• pyNeuroML

  Public
  A single package in Python unifying scripts and modules for reading, writing, simulating and analysing NeuroML2/LEMS models.

  Python

  •

  GNU Lesser General Public License v3.0

  •3535 forks•5353 stars•4444 issues•66 pull requests•Updated Jul 31, 2026Jul 31, 2026

• NeuroML2

  Public
  This repository hosts the NeuroML 2 Schema, the ComponentType definitions in LEMS and the core documentation of NeuroML2.

  Python

  •

  GNU Lesser General Public License v3.0

  •2525 forks•6666 stars•6262 issues•33 pull requests•Updated Jul 23, 2026Jul 23, 2026

• org.neuroml.model.injectingplugin

  Public
  NeuroML JAXB plug-in to inject code during code generation from schema

  neuroml

  neuroml

  Java

  •

  GNU Lesser General Public License v3.0

  •44 forks•11 star•00 issues•00 pull requests•Updated Jul 22, 2026Jul 22, 2026

• NeuroML_API

  Public
  C++ API for NeuroML 2

  computational-neurosciencecombinecomputational-modelling+ 2

  computational-neurosciencecombinecomputational-modellingneuromlstandardisation

  C++

  •

  MIT License

  •22 forks•22 stars•33 issues•00 pull requests•Updated Jul 21, 2026Jul 21, 2026

• eden

  Public
  Read-only mirror code repository for the EDEN neural simulator, on Github. ❗Please go to the main repo for issues, pull requests, and other interaction: https:/…

  C++

  •

  Other

  •22 forks•00 stars•00 issues•00 pull requests•Updated Jun 2, 2026Jun 2, 2026

• org.neuroml.model

  Public
  NeuroML v2 Java API

  Java

  •

  GNU Lesser General Public License v3.0

  •44 forks•55 stars•33 issues•11 pull request•Updated May 19, 2026May 19, 2026

• org.neuroml.import

  Public
  Import other formats into LEMS & combine with NeuroML models

  computational-neurosciencelemsneuroml

  computational-neurosciencelemsneuroml

  Java

  •

  GNU Lesser General Public License v3.0

  •22 forks•11 star•22 issues•11 pull request•Updated May 19, 2026May 19, 2026

• org.neuroml1.model

  Public
  NeuroML v1 Java Model API

  neuroml

  neuroml

  Java

  •

  GNU Lesser General Public License v3.0

  •22 forks•22 stars•00 issues•11 pull request•Updated May 19, 2026May 19, 2026

• jNeuroML

  Public
  A single package (command line tool and library) in Java to validate, simulate, translate and analyse NeuroML 2 models

  Java

  •

  GNU Lesser General Public License v3.0

  •2323 forks•1212 stars•1313 issues•11 pull request•Updated May 19, 2026May 19, 2026

• org.neuroml.export

  Public
  Export from NeuroML & LEMS

  brianneuronpynn+ 3

  brianneuronpynnsbmllemsneuroml

  Java

  •

  GNU Lesser General Public License v3.0

  •1212 forks•99 stars•1414 issues•33 pull requests•Updated May 19, 2026May 19, 2026

• nml-ai-data

  Public
  Data for nml-ai

  00 forks•00 stars•00 issues•00 pull requests•Updated Dec 3, 2025Dec 3, 2025

• NeuroMech

  Public
  Tests on the NeuroMech language for neuromusculoskeletal model specifications

  Python

  •

  MIT License

  •00 forks•22 stars•00 issues•00 pull requests•Updated Sep 1, 2025Sep 1, 2025

• NeuroMLWebsite

  Public
  The NeuroML homepage. Note: main NeuroML docs are now at https://docs.neuroml.org & source of those at https://github.com/NeuroML/Documentation

  HTML

  •22 forks•33 stars•00 issues•00 pull requests•Updated Jul 25, 2025Jul 25, 2025

• Cvapp-NeuroMorpho.org

  Public
  Version of Cvapp as used on NeuroMorpho.org. Based on Robert Cannon's initial implementation.

  XSLT

  •66 forks•1616 stars•00 issues•00 pull requests•Updated Jul 1, 2024Jul 1, 2024

• xppaut

  Public
  General differential equation solver and bifurcation package

  C

  •

  GNU General Public License v2.0

  •1414 forks•00 stars•00 issues•11 pull request•Updated Apr 17, 2024Apr 17, 2024

• xppy

  Public
  FORK of: XPPy, a Python interface for Bard Ermentrout's XPP

  Python

  •

  GNU Lesser General Public License v3.0

  •4444 forks•11 star•00 issues•00 pull requests•Updated Jan 29, 2024Jan 29, 2024

• n2a

  Public
  An object-oriented language for modeling large-scale neural systems, along with an IDE for writing and simulating models.

  Java

  •77 forks•00 stars•00 issues•00 pull requests•Updated Dec 4, 2023Dec 4, 2023

• NeuroMLToolbox

  Public
  NeuroML 2 toolbox for MATLAB

  11 fork•11 star•00 issues•00 pull requests•Updated Nov 30, 2023Nov 30, 2023

• .github

  Public
  The NeuroML organisation template repository

  Python

  •00 forks•11 star•00 issues•00 pull requests•Updated Sep 21, 2023Sep 21, 2023

• stochdiff

  Public
  Stochastic diffusion simulator

  Java

  •

  GNU General Public License v2.0

  •66 forks•00 stars•00 issues•00 pull requests•Updated Jul 8, 2022Jul 8, 2022

• NML2_LEMS_Examples

  Public
  Python

  •11 fork•00 stars•00 issues•00 pull requests•Updated Mar 26, 2021Mar 26, 2021

• neuroml2modelLite

  Public
  Work in progress

  Java

  •

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 13, 2020Oct 13, 2020

• neuroml2model

  Public
  Java

  •

  GNU General Public License v3.0

  •11 fork•00 stars•00 issues•00 pull requests•Updated Aug 16, 2018Aug 16, 2018

• NetworkShorthand

  Public
  00 forks•11 star•00 issues•00 pull requests•Updated Jun 28, 2018Jun 28, 2018

• NeuroMLToPOV-Ray

  Public
  Converting NeuroML v1&2 files to POV-Ray: http://www.povray.org

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 25, 2018May 25, 2018

• Presentations

  Public
  Presentation slides related to NeuroML & LEMS

  00 forks•00 stars•00 issues•00 pull requests•Updated Oct 27, 2017Oct 27, 2017

• mod2neuroml

  Public
  Pipelines for generating NeuroML2/Lems from mod files (NEURON simulator)

  00 forks•11 star•11 issue•00 pull requests•Updated Aug 30, 2017Aug 30, 2017