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    26 repositories

    • hla-curation-interface

      Public
      The HLA Curation Interface (HCI) is a tool designed to facilitate the curation of information about HLA alleles and haplotypes.
      medicinegeneticsbiology
      medicinegeneticsbiology
      Python
      •
      MIT License
      •0•0•8•0•Updated May 13, 2026May 13, 2026

    • vci-v4

      Public
      Variant Curation Interface v4
      TypeScript
      •
      MIT License
      •0•0•10•0•Updated Mar 10, 2026Mar 10, 2026

    • affiliations-service

      Public
      Stanford ClinGen's affiliations service
      Python
      •
      MIT License
      •1•0•4•5•Updated Feb 26, 2026Feb 26, 2026

    • VCI-transformation

      Public
      Scripts for transforming VCI JSON-LD into DMWG Interpretation JSON-LD
      Python
      •1•0•0•2•Updated Feb 9, 2026Feb 9, 2026

    • gene-and-variant-curation-tools

      Public
      ClinGen's gene and variant curation interfaces (GCI & VCI). Developed by Stanford ClinGen team.
      JavaScript
      •
      MIT License
      •1•3•145•60•Updated Nov 14, 2025Nov 14, 2025

    • stanford-hci

      Public
      Stanford ClinGen's HLA curation interface
      Python
      •0•0•8•0•Updated May 1, 2025May 1, 2025

    • stanford-dev-docs

      Public
      Stanford ClinGen's central developer documentation repository
      Python
      •0•0•0•0•Updated Apr 26, 2025Apr 26, 2025

    • vci-v4-gks

      Public
      The variant curation interface (VCI) version 4's Genomic Knowledge Standards (GKS) implementation
      Python
      •
      Apache License 2.0
      •1•0•0•0•Updated Oct 11, 2024Oct 11, 2024

    • interpretation_json

      Public
      Python library for creating JSON documents conforming to the DMWG interpretation model.
      Python
      •
      Eclipse Public License 1.0
      •1•0•0•0•Updated May 23, 2023May 23, 2023

    • clincoded

      Public
      This GCI/VCI 1.0 platform has now been retired, and replaced with our new 2.0 platform:
      JavaScript
      •
      MIT License
      •9•25•1•13•Updated Sep 16, 2022Sep 16, 2022

    • test-pub

      Public
      JavaScript
      •0•0•0•0•Updated Sep 20, 2021Sep 20, 2021

    • python_react_programming_starter

      Public
      Cherry Lab Python Programming test; based on Flask/Elasticsearch
      JavaScript
      •
      MIT License
      •6•0•0•0•Updated Nov 20, 2019Nov 20, 2019

    • react_programming_starter

      Public
      An example react application used by SGD.
      JavaScript
      •
      MIT License
      •6•0•0•0•Updated Nov 10, 2018Nov 10, 2018

    • clincoded-ui-dev

      Public
      Temporary UI development workbench
      JavaScript
      •1•1•0•0•Updated Jan 22, 2018Jan 22, 2018

    • ildb

      Public
      Individual Level Database
      CSS
      •
      MIT License
      •0•0•0•0•Updated Sep 20, 2017Sep 20, 2017

    • pyencoded-tools

      Public
      Python
      •
      MIT License
      •13•0•0•0•Updated Jun 8, 2017Jun 8, 2017

    • snovault

      Public
      The SnoVault general purpose hybrid object-relational database
      Python
      •
      MIT License
      •8•0•0•0•Updated Mar 17, 2017Mar 17, 2017

    • variant-server

      Public
      A simple web-based service to return JSON objects describing known and predicted effects of genetic variants
      Shell
      •
      GNU General Public License v3.0
      •1•2•0•0•Updated Dec 15, 2016Dec 15, 2016

    • predict-var

      Public
      Variant Predictions
      0•0•0•0•Updated Jul 1, 2016Jul 1, 2016

    • clingen

      Public
      ClinGen website ProcessWire template
      PHP
      •1•0•0•0•Updated Feb 8, 2016Feb 8, 2016

    • LoadData

      Public
      Python scripts to load pre-curation data into local mongodb
      Python
      •0•0•0•0•Updated Jan 29, 2016Jan 29, 2016

    • load-data-node

      Public
      A version of LoadData written in node.
      JavaScript
      •0•0•0•0•Updated Jun 4, 2015Jun 4, 2015

    • Spindle

      Public
      HTML
      •0•0•0•0•Updated May 26, 2015May 26, 2015

    • Spindle-1

      Public
      Gene Curation - ClinGen
      JavaScript
      •0•0•0•0•Updated May 6, 2015May 6, 2015

    • clinvar-demo

      Public
      Demonstration of using the genboree.com REST API
      PHP
      •0•2•0•0•Updated Jul 25, 2014Jul 25, 2014

    • svgtest

      Public
      Demonstration of hovering over elements of an SVG
      CSS
      •0•0•0•0•Updated Jun 23, 2014Jun 23, 2014
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