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13 changes: 13 additions & 0 deletions .seqera/environment.yaml
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# Conda environment for Nextflow training in Seqera Studios
name: training
channels:
- conda-forge
- bioconda
dependencies:
- nextflow=25.10.2
# TODO: nf-test from conda lacks v2 parser support until next release
# See: https://github.com/askimed/nf-test/pull/336
- nf-test
- nf-core
- pre-commit
- mkdocs-quiz>=1.5.2
26 changes: 26 additions & 0 deletions .seqera/studio-config.yaml
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schemaVersion: "0.0.1"
kind: "studio-config"
session:
name: "Nextflow Training"
description: "Nextflow training materials development environment"
template:
kind: "registry"
registry: "public.cr.seqera.io/platform/data-studio-vscode:1.101.2-0.9"
clone:
enabled: true
path: "/workspace/training"
dependencies:
condaEnvironmentFile: "environment.yaml"
computeRequirements:
awsBatch:
cpu: 8
memory: 32768
environmentVariables:
- name: NXF_HOME
value: "/workspace/.nextflow"
- name: NXF_EDGE
value: "0"
- name: NXF_VER
value: "25.10.2"
- name: NXF_SYNTAX_PARSER
value: "v2"
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