GitHub - mbouda/bigRootManuscriptCode: Contains code supporting calculations in the Big Root Approximation manuscript (JAMES)

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 3 Commits
LICENSE.txt		LICENSE.txt
baseLineOpt.m		baseLineOpt.m
baseLineRes.mat		baseLineRes.mat
bigRootQRGCSubObj2.m		bigRootQRGCSubObj2.m
bigRootQRGCSubSumCon.m		bigRootQRGCSubSumCon.m
bootStrapOpt.m		bootStrapOpt.m
bootsX.mat		bootsX.mat
clappHornPsi.m		clappHornPsi.m
clappHornTh.m		clappHornTh.m
constructCase1.m		constructCase1.m
constructCase1b.m		constructCase1b.m
crankNicholsonFreeTH.m		crankNicholsonFreeTH.m
crankNicholsonParallelTH2.m		crankNicholsonParallelTH2.m
crankNicholsonQRTH.m		crankNicholsonQRTH.m
crankNicholsonSeriesTH2.m		crankNicholsonSeriesTH2.m
driveAll.m		driveAll.m
errorSens.mat		errorSens.mat
errorTable.mat		errorTable.mat
fit1BEval.m		fit1BEval.m
fit1BGEval.m		fit1BGEval.m
fitCase1B.m		fitCase1B.m
fitCase1BG.m		fitCase1BG.m
fitCase1BGQR.m		fitCase1BGQR.m
fitCase1BQR.m		fitCase1BQR.m
formParams5.m		formParams5.m
formPentAGC.m		formPentAGC.m
formPentAn2AKG.m		formPentAn2AKG.m
formPentAn2AKOld.m		formPentAn2AKOld.m
formPentAn2BKG.m		formPentAn2BKG.m
formPentAn2BKOld.m		formPentAn2BKOld.m
formPentAnAK2.m		formPentAnAK2.m
formPentAnAKG.m		formPentAnAKG.m
formPentAnBK2.m		formPentAnBK2.m
formPentAnBKG.m		formPentAnBKG.m
formPentBGC.m		formPentBGC.m
forwPentAnCombObjCon2.m		forwPentAnCombObjCon2.m
forwPentAnCombObjConG.m		forwPentAnCombObjConG.m
forwPentAnQRGCObj.m		forwPentAnQRGCObj.m
forwPentAnQRObj.m		forwPentAnQRObj.m
freeQRGCObj.m		freeQRGCObj.m
freeTHGCObj.m		freeTHGCObj.m
gradJG.m		gradJG.m
gradJOld.m		gradJOld.m
inits.mat		inits.mat
linSysLF2.m		linSysLF2.m
moments1b.mat		moments1b.mat
occur.m		occur.m
parallelObj3.m		parallelObj3.m
parallelPred.m		parallelPred.m
parallelSumCon.m		parallelSumCon.m
postProcCase1b.m		postProcCase1b.m
predBigRootQRGC.m		predBigRootQRGC.m
predBigRootTHGC.m		predBigRootTHGC.m
predFreeQRGC.m		predFreeQRGC.m
predFreeTHGC.m		predFreeTHGC.m
predTriDiag.m		predTriDiag.m
readme.txt		readme.txt
sensitivity.m		sensitivity.m
seriesSumCon.m		seriesSumCon.m
singleRootLibrary.m		singleRootLibrary.m
triDiagObj.m		triDiagObj.m
unconstrained.m		unconstrained.m
unconstrainedResults.mat		unconstrainedResults.mat
uswrcDroughtDataSet.mat		uswrcDroughtDataSet.mat

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bigRootManuscriptCode repository

Software

The repository contains source code that runs the analyses included in the manuscript "A big root approximation of site-scale vegetation water uptake", under consideration at Journal of Advances in Modelling Earth Systems.

All analyses are run from the script driveAll.m, all other source files are functions executed from this file. Furhter notes on code structure and execution are also found in that file as comments.

License
See the LICENSE.txt file for rights and limitations (CC BY-NC-SA 4.0).