GitHub - hyphaltip/genome-scripts: Genome Scripts used in fungal comparative genomics

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 517 Commits
GO		GO
R-gists		R-gists
RNA-Seq		RNA-Seq
analyses		analyses
annotation		annotation
assembly		assembly
cluster_scripts		cluster_scripts
comparative		comparative
conservation_profile		conservation_profile
data_format		data_format
gbrowse_tools		gbrowse_tools
gene_prediction		gene_prediction
gff_tools		gff_tools
metagenomics		metagenomics
misc		misc
mutant_mapping		mutant_mapping
ncbi		ncbi
phylogenetics		phylogenetics
popgen		popgen
seq		seq
seqfeature		seqfeature
short-read		short-read
small-RNA		small-RNA
splice-analyses		splice-analyses
summary_plots		summary_plots
viz		viz
.gitignore		.gitignore
LICENSE		LICENSE
README		README

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This repository is for public scripts which do data formatting, collation, and analysis.

This is mainly Perl code for genome annotation and processing.

Jason Stajich
University of California, Riverside
jason.stajich [at] ucr.edu
http://lab.stajich.org