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Avoid Zarr-to-HDF5 export deadlock and make the IO finalizer non-blocking - #1547

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fix/zarr-export-deadlock-and-finalizer
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Avoid Zarr-to-HDF5 export deadlock and make the IO finalizer non-blocking#1547
rly wants to merge 10 commits into
devfrom
fix/zarr-export-deadlock-and-finalizer

Isolate the open-IO registry in the atexit cleanup test

98d5f06
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Codecov / codecov/project succeeded Jul 23, 2026 in 0s

93.15% (-0.08%) compared to f1b2eb4

View this Pull Request on Codecov

93.15% (-0.08%) compared to f1b2eb4

Details

Codecov Report

❌ Patch coverage is 84.00000% with 4 lines in your changes missing coverage. Please review.
✅ Project coverage is 93.15%. Comparing base (f1b2eb4) to head (98d5f06).

Files with missing lines Patch % Lines
src/hdmf/backends/hdf5/h5tools.py 50.00% 1 Missing and 1 partial ⚠️
src/hdmf/backends/io.py 90.47% 2 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##              dev    #1547      +/-   ##
==========================================
- Coverage   93.22%   93.15%   -0.08%     
==========================================
  Files          41       41              
  Lines       10221    10245      +24     
  Branches     2115     2119       +4     
==========================================
+ Hits         9529     9544      +15     
- Misses        415      422       +7     
- Partials      277      279       +2     

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