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Merge pull request #63 from bslakman/master
Added solvation thermo groups for CtOt and OtCt. This makes the solvent effects for carbon monoxide, `+C#O-`, into that for `[CH2]=O`. Which it might not be like, but there are no Platts' groups for CO. Hopefully we can find some Abraham parameters to put in the library. But at least this should stop it crashing.
2 parents c602f61 + 272d143 commit 6c4505a

1 file changed

Lines changed: 47 additions & 1 deletion

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input/solvation/groups/abraham.py

Lines changed: 47 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -280,6 +280,28 @@
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""",
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)
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entry(
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index = 10,
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label = "CtOt",
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group =
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"""
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1 * Ct u0 {2,T}
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2 Ot u0 {1,T}
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""",
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solute = SoluteData(
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S = -0.085,
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B = 0.019,
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E = -0.045,
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L = 0.244,
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A = 0,
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),
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shortDesc = u"""Fake value for C#O that corresponds to its resonance isomer""",
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longDesc =
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u"""
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""",
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)
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entry(
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index = 57,
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label = "Cdd",
@@ -393,7 +415,7 @@
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label = "O",
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group =
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"""
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1 * [Os,Od] u0
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1 * [Os,Od,Ot] u0
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""",
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solute = None,
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shortDesc = u"""""",
@@ -484,6 +506,28 @@
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""",
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)
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entry(
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index = 30,
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label = "OtCt",
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group =
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"""
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1 * Ot u0 {2,T}
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2 Ct u0 {1,T}
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""",
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solute = SoluteData(
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S = 0.37,
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B = 0.334,
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E = -0.041,
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L = 0.495,
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A = 0,
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),
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shortDesc = u"""Fake value for C#O that corresponds to resonance isomer""",
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longDesc =
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u"""
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""",
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)
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entry(
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index = -8,
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label = "N",
@@ -1117,6 +1161,7 @@
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L4: CdsH
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L4: Cds-noH
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L3: Ct
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L4: CtOt
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L3: Cdd
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L3: Cb
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L4: Cb-noH
@@ -1127,6 +1172,7 @@
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L4: OssH
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L4: Oss-noncyclic
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L3: Od
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L3: OtCt
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L2: N
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L3: N3s
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L4: NO2

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