v0.6.3

What's Changed

• Fix exception logging by @apriltuesday in #161
• EVA-4169: Fail early when no VCF files found in metadata by @apriltuesday in #162
• EVA-4163: Add check for taxId in BioSamples characteristics by @apriltuesday in #163
• EVA-4191: Fix CodeQL alerts by @apriltuesday in #164
• Add schema at the end of validation by @tcezard in #165
• EVA-4113 allow eva-sub-cli to use version 1.* of common pyutils by @nitin-ebi in #166

Full Changelog: v0.6.2...v0.6.3

v0.6.2

What's Changed

• EVA-4130 Make sure cli report paths are correct by @nitin-ebi in #156
• Eva3509 caseinsensitive metadata by @khetherin in #157
• Fix conversion of analysis links by @apriltuesday in #158
• refactor by @nitin-ebi in #159
• Remove work directory after nextflow completion by @tcezard in #160

New Contributors

• @khetherin made their first contribution in #157

Full Changelog: v0.6.1...v0.6.2

v0.6.1

What's Changed

• Improve robustness of the conversion from spreadsheet to JSON by @tcezard in #153
• Enforce SampleInVCF only when genotypes evidence types by @tcezard in #154
• Update Docker image version by @tcezard in #155

Full Changelog: v0.6.0...v0.6.1

v0.6.0

What's Changed

• EVA-4068 - Call home by @tcezard in #146
• Fixes to call home feature by @tcezard in #147
• Force docker platform by @tcezard in #148
• EVA-4085 - Prevent the hold date to be more than 2 years in the future. by @tcezard in #149
• Fix trim down collection and reporting by @tcezard in #150
• Ensure that the call home payload matches the schema by @tcezard in #151
• Update docker image version by @tcezard in #152

Full Changelog: v0.5.3...v0.6.0

v0.5.3

What's Changed

• Fix multiple analyses with the same reference genome by @tcezard in #143

Full Changelog: v0.5.2...v0.5.3

v0.5.2

What's Changed

• EVA-3987 Remove non-vcf files from metadata by @nitin-ebi in #134
• EVA-3988 - Add errors to the validation report when missing md5 of file size info by @tcezard in #136
• EVA-3942: Check if reference is GCA by @apriltuesday in #137
• EVA-3995: Update validation overview doc by @apriltuesday in #135
• EVA-4002: Remove ability to pass files on command line by @apriltuesday in #139
• Add publication regex by @tcezard in #138
• EVA-3996: Update input files overview by @apriltuesday in #140
• Update docker image by @tcezard in #141

Full Changelog: v0.5.1...v0.5.2

v0.5.1

What's Changed

• Fix data validation in eva submission template by @tcezard in #129
• EVA-3972 Add documentation for submitting to an existing project by @nitin-ebi in #128
• Add validation tasks by @apriltuesday in #119
• EVA-3989: Update documentation for validation tasks by @apriltuesday in #131
• EVA-3986 upload metadata json and show error return by eva-submission-ws by @nitin-ebi in #132
• Update docker version by @tcezard in #133

Full Changelog: v0.5.0...v0.5.1

v0.5.0

What's Changed

• EVA-3621 Add explicit support for adding analyses to an existing project by @nitin-ebi in #115
• Fix conversion configuration and update docker image by @tcezard in #126
• EVA-3669 - Cast all to string by @tcezard in #124
• Only check evidence types that have the property by @tcezard in #125
• EVA-3975 - Use different icon for error vs critical by @tcezard in #127

Full Changelog: v0.4.14...v0.5.0

v0.4.14

What's Changed

• EVA-3913: Update installation documentation by @apriltuesday in #114
• Add label to all nextflow tasks by @tcezard in #116
• Do not update metadata when evidence type check fails by @apriltuesday in #118
• Ensure that the fasta and vcf files are files and not directories by @tcezard in #117
• Remove sample schemas besides ERC000011 by @apriltuesday in #120

Full Changelog: v0.4.13...v0.4.14

v0.4.13

What's Changed

• EVA-3903: Align JSON fields with ERC000011 and add schema version by @apriltuesday in #109

Full Changelog: v0.4.12...v0.4.13