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Achievement: YOLOAchievement: QuickdrawAchievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

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  1. wslh-bio/dryad wslh-bio/dryad Public

    Dryad is a Nextflow pipeline for examining prokaryote relatedness. Dryad can perform a reference free analysis and/or SNP analysis.

    Groovy 21 5

  2. wslh-bio/spriggan wslh-bio/spriggan Public

    Spriggan is a pipeline used for assembly of bacterial whole genome sequence data and identification of antibiotic resistance genes.

    Python 16 3

  3. wslh-bio/ar_report_generator wslh-bio/ar_report_generator Public

    AR Report Generator is used to render a report from the output of pipelines that identify antibiotic resistance (AR) genes and/or examine prokaryote relatedness in outbreaks

    Dockerfile 8 1

  4. wslh-bio/SPNtypeID wslh-bio/SPNtypeID Public

    SPNtypeID is a Nextflow pipeline used for genome assembly and serotyping of Streptococcus pneumoniae.

    Python 3 1