Juno-user-guide/mkdocs.yml at main · utdal/Juno-user-guide · GitHub

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site_name: Juno User Guide
site_description: Documentation for the Juno HPC Cluster at UT Dallas
site_url: https://utdallas-hpc-juno-ug.readthedocs-hosted.com/

docs_dir: docs

plugins:
  - search

markdown_extensions:
  - toc:
      title: In this page
  - attr_list
  - md_in_html
  - admonition
  - pymdownx.details
  - pymdownx.superfences

theme:
  name: material
  logo: assets/logo.png
  favicon: assets/logo.png
  palette:
    primary: custom
    accent: custom
  features:
    - navigation.tabs
    - navigation.sections
    - search.suggest
    - search.highlight

extra_css:
  - stylesheets/extra.css

nav:
  - Home: index.md
  - Getting Started:
    - Account Request: getting-started/account-request.md
    - Login: getting-started/login.md
    - SSH Key Authentication: getting-started/ssh-keys.md
    - Storage & Data Transfer: getting-started/storage.md
    - Scratch Space: getting-started/scratch-space.md
    - Saturn Research Data Storage: getting-started/saturn.md
    - Hardware Overview: getting-started/hardware.md
  - Working on Juno:
    - Linux Commands: working-on-juno/linux-commands.md
    - Module System: working-on-juno/modules.md
    - Available Software: working-on-juno/software.md
  - Running Programs:
    - SLURM Job Scheduler: running-programs/slurm.md
    - Monitoring Jobs and Cluster State: running-programs/advanced-slurm.md
    - Common Scientific Programs: running-programs/common-programs.md
    - Parallelism Models: running-programs/parallelism.md
    - Launcher: running-programs/launcher.md
  - GUI & Tools:
    - Open OnDemand: gui-and-tools/open-ondemand.md
    - GUI Programs (X11): gui-and-tools/gui-programs.md
    - JupyterLab: gui-and-tools/jupyter.md
    - RStudio: gui-and-tools/rstudio.md
    - VSCode: gui-and-tools/vscode.md
  - GPU computing, AI, and Machine Learning:
    - GPU Computing on Juno: ai-and-ml/index.md
    - PyTorch Training Tutorial: ai-and-ml/pytorch-training.md
    - GPU Performance & Monitoring: ai-and-ml/gpu-performance.md
    - AlphaFold 3: ai-and-ml/alphafold3.md
  - Advanced:
    - Containers: advanced/containers.md
    - Python Optimization: advanced/python-optimization.md
    - Miniconda: advanced/miniconda.md
  - Support:
    - Getting Help: support/getting-help.md
    - FAQ: support/faq.md
    - Prohibited Technologies: support/prohibited-technologies.md