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489 lines (427 loc) · 23.8 KB
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import os
from pathlib import Path
import json
import time
import random
from typing import *
import traceback
import itertools
from numbers import Number
import io
import numpy as np
import cv2
from PIL import Image
import torch
import torchvision.transforms.v2.functional as TF
try:
import utils3d_moge as utils3d
except ImportError:
import utils3d
import pipeline
from tqdm import tqdm
from ..utils.io import *
from ..utils.geometry_numpy import mask_aware_nearest_resize_numpy, harmonic_mean_numpy, norm3d, depth_occlusion_edge_numpy
from ..utils.data_augmentation import sample_perspective, warp_perspective, image_color_augmentation
from ..utils.tools import catch_exception
_NO_BUCKET = object()
class _SourceBatchGroup(pipeline.Batch):
"""Regroup surviving instances back into the source batch they came from.
``_sample_batch`` emits fixed-size batches whose instances share one target
``(height, width)``; the upstream ``Filter`` may then drop some of them as
invalid. Since the ``Parallel`` nodes in between are FIFO, every instance of
a source batch arrives contiguously, so only one bucket is ever open: a new
``batch_id`` means the previous source batch is complete.
Incomplete buckets are dropped. That matches what the trainer effectively
saw before this was keyed by source batch -- a short bucket was keyed by
``(height, width)``, which is derived from two continuous random draws and
so practically never recurred, meaning the bucket could never be completed
and was retained forever. The behaviour is the same; the unbounded
retention is not. To train on the survivors instead of dropping them, put
the bucket to the output in ``_discard_incomplete`` below.
"""
def __init__(self, batch_size: int, name: Optional[str] = None):
super().__init__(batch_size=batch_size, patience=None, name=name)
self.num_incomplete_batches = 0
self.num_dropped_instances = 0
def _discard_incomplete(self, bucket: list):
if bucket:
self.num_incomplete_batches += 1
self.num_dropped_instances += len(bucket)
def loop(self):
from pipeline.components import EndOfInput, ExceptionInNode
from pipeline.queue import ShutDown
bucket: list = []
bucket_id = _NO_BUCKET
try:
while True:
item = self.input.get()
if isinstance(item, (EndOfInput, ExceptionInNode)):
# A full bucket is emitted as soon as it fills, so anything
# still open here is necessarily incomplete.
self._discard_incomplete(bucket)
bucket, bucket_id = [], _NO_BUCKET
self.output.put(item)
continue
item_id = item.get('batch_id', _NO_BUCKET)
if item_id != bucket_id:
self._discard_incomplete(bucket)
bucket, bucket_id = [], item_id
bucket.append(item)
if len(bucket) >= self.batch_size:
self.output.put(bucket)
bucket, bucket_id = [], _NO_BUCKET
except ShutDown:
return
def _default_name(self):
return f"SourceBatchGroup(size={self.batch_size})"
class TrainDataLoaderPipeline:
def __init__(self, config: dict, batch_size: int, buffer_size: int = 8, workspace: Path = None, seed: Optional[int] = None):
self.config = config
self.workspace = workspace
self._rng = random.Random(seed)
num_load_workers = int(os.environ.get('MOGE_NUM_LOAD_WORKERS', 4))
num_process_workers = int(os.environ.get('MOGE_NUM_PROCESS_WORKERS', 8))
self.batch_size = batch_size
self.clamp_max_depth = config['clamp_max_depth']
self.fov_range_absolute = config.get('fov_range_absolute', 0.0)
self.fov_range_relative = config.get('fov_range_relative', 0.0)
self.center_augmentation = config.get('center_augmentation', 0.0)
self.image_augmentation = config.get('image_augmentation', [])
self.depth_interpolation = config.get('depth_interpolation', 'bilinear')
# Reject-and-resample: if the warped finite-depth ratio (probed at low
# resolution) falls below ``min_valid_after_warp``, we resample the
# perspective up to ``resample_max_retries`` extra times and keep the
# best attempt. Per-dataset overrides are honored via the dataset cfg.
self.min_valid_after_warp = config.get('min_valid_after_warp', 0.01)
self.resample_max_retries = config.get('resample_max_retries', 8)
if 'image_sizes' in config:
self.image_size_strategy = 'fixed'
self.image_sizes = config['image_sizes']
elif 'aspect_ratio_range' in config and 'area_range' in config:
self.image_size_strategy = 'aspect_area'
self.aspect_ratio_range = config['aspect_ratio_range']
self.area_range = config['area_range']
else:
raise ValueError('Invalid image size configuration')
# Load datasets
self.datasets = {}
for dataset in tqdm(config['datasets'], desc='Loading datasets'):
name = dataset['name']
content = Path(dataset['path'], dataset.get('index', '.index.txt')).joinpath().read_text()
filenames = content.splitlines()
self.datasets[name] = {
**dataset,
'path': dataset['path'],
'filenames': filenames,
}
self.dataset_names = [dataset['name'] for dataset in config['datasets']]
self.dataset_weights = [dataset['weight'] for dataset in config['datasets']]
# debug sample balance
self.dataset_sample_count = {name: 0 for name in self.dataset_names}
# Build pipeline
# Regroup by source batch so that ``Filter`` dropping invalid
# instances does not lead to mixed-size batches.
self._batch_grouper = _SourceBatchGroup(self.batch_size)
self.pipeline = pipeline.Sequential([
self._sample_batch,
pipeline.Unbatch(),
pipeline.Parallel([self._load_instance] * num_load_workers),
pipeline.Parallel([self._process_instance] * num_process_workers),
pipeline.Filter(lambda instance: instance['label_type'] != 'invalid'),
self._batch_grouper,
self._collate_batch,
pipeline.Buffer(buffer_size),
])
def state_dict(self) -> dict:
"""Return the RNG state so training can resume with the same data order."""
return {'rng_state': self._rng.getstate()}
def load_state_dict(self, state_dict: dict):
"""Restore the RNG state from a previous ``state_dict()`` call."""
self._rng.setstate(state_dict['rng_state'])
def _get_invalid_instance(self, torch_instance: bool = False, height: int = 256, width: int = 256, gen_info: bool = False) -> Dict[str, Union[np.ndarray, torch.Tensor, str, float, bool]]:
invalid_depth = np.ones((height, width), dtype=np.float32)
invalid_instance = {
'intrinsics': np.array([[1.0, 0.0, 0.5], [0.0, 1.0, 0.5], [0.0, 0.0, 1.0]], dtype=np.float32),
'image': np.zeros((3, height, width), dtype=np.float32),
'normal': np.zeros((height, width, 3), dtype=np.float32),
'depth': invalid_depth,
'depth_mask_fin': np.isfinite(invalid_depth),
'depth_mask_inf': np.isinf(invalid_depth),
'label_type': 'invalid',
'is_metric': False,
}
if gen_info:
invalid_instance.update({
'width': width,
'height': height,
'dataset': 'invalid',
'filename': 'invalid',
'path': 'invalid',
})
if torch_instance:
return {k: torch.from_numpy(v) if isinstance(v, np.ndarray) else v for k, v in invalid_instance.items()}
else:
return invalid_instance
def _sample_batch(self):
rng = self._rng
batch_id = 0
last_area = None
while True:
# Depending on the sample strategy, choose a dataset and a filename
batch_id += 1
batch = []
# Sample instances
for _ in range(self.batch_size):
dataset_name = rng.choices(self.dataset_names, weights=self.dataset_weights)[0]
filename = rng.choice(self.datasets[dataset_name]['filenames'])
self.dataset_sample_count[dataset_name] += 1
path = Path(self.datasets[dataset_name]['path'], filename)
instance = {
'batch_id': batch_id,
'seed': rng.randint(0, 2 ** 32 - 1),
'dataset': dataset_name,
'filename': filename,
'path': path,
'label_type': self.datasets[dataset_name]['label_type'],
}
batch.append(instance)
# Decide the image size for this batch
if self.image_size_strategy == 'fixed':
width, height = rng.choice(self.config['image_sizes'])
elif self.image_size_strategy == 'aspect_area':
area = rng.uniform(*self.area_range)
aspect_ratio_ranges = [self.datasets[instance['dataset']].get('aspect_ratio_range', self.aspect_ratio_range) for instance in batch]
aspect_ratio_range = (min(r[0] for r in aspect_ratio_ranges), max(r[1] for r in aspect_ratio_ranges))
aspect_ratio = rng.uniform(*aspect_ratio_range)
width, height = int((area * aspect_ratio) ** 0.5), int((area / aspect_ratio) ** 0.5)
else:
raise ValueError('Invalid image size strategy')
for instance in batch:
instance['width'], instance['height'] = width, height
yield batch
def _load_instance(self, instance: dict):
try:
if instance is None:
return None
image = read_image(Path(instance['path'], 'image.jpg'))
depth = read_depth(Path(instance['path'], self.datasets[instance['dataset']].get('depth', 'depth.png')))
meta = read_json(Path(instance['path'], 'meta.json'))
intrinsics = np.array(meta['intrinsics'], dtype=np.float32)
has_metric_annotation = False
if "metric_scale" in meta:
depth *= meta["metric_scale"]
has_metric_annotation = True
elif "depth_scale" in meta:
depth *= meta["depth_scale"]
has_metric_annotation = True
data = {
'image': image,
'depth': depth,
'intrinsics': intrinsics,
'path': str(instance['path']),
'has_metric_annotation': has_metric_annotation,
}
instance.update({
**data,
})
except Exception as e:
traceback.print_exc()
print(f"Failed to load instance {instance['dataset']}/{instance['filename']} because of exception:", e)
instance.update(self._get_invalid_instance())
return instance
def _process_instance(self, instance: Dict[str, Union[np.ndarray, str, float, bool]]):
try:
if instance is None:
return self._get_invalid_instance(torch_instance=True, gen_info=True)
if instance['label_type'] == 'invalid':
instance.update(self._get_invalid_instance(torch_instance=True))
return instance
raw_image, raw_depth, raw_intrinsics = instance['image'], instance['depth'], instance['intrinsics']
raw_normal, raw_normal_mask = utils3d.np.depth_map_to_normal_map(raw_depth, intrinsics=raw_intrinsics, mask=np.isfinite(raw_depth), edge_threshold=88)
raw_normal = np.where(raw_normal_mask[..., None], raw_normal, np.nan)
depth_unit = self.datasets[instance['dataset']].get('depth_unit', None)
tgt_width, tgt_height = instance['width'], instance['height']
tgt_aspect = tgt_width / tgt_height
rng = np.random.default_rng(instance['seed'])
# Sample perspective transformation with reject-and-resample on the
# coarse warped finite-depth ratio. This avoids spending the
# expensive full-res warp budget on viewpoints that land entirely
# in NaN regions (sky / empty background).
ds_cfg = self.datasets[instance['dataset']]
min_valid_after_warp = ds_cfg.get('min_valid_after_warp', self.min_valid_after_warp)
max_resample_retries = ds_cfg.get('resample_max_retries', self.resample_max_retries)
raw_finite_mask = np.isfinite(raw_depth)
probe_h = 64
probe_w = max(1, int(round(probe_h * tgt_aspect)))
best = {'ratio': -1.0, 'tgt_intrinsics': None, 'R': None, 'transform': None}
for _attempt in range(max_resample_retries + 1):
tgt_intrinsics_try, R_try = sample_perspective(
raw_intrinsics,
tgt_aspect=tgt_aspect,
center_augmentation=ds_cfg.get('center_augmentation', self.center_augmentation),
fov_range_absolute=ds_cfg.get('fov_range_absolute', self.fov_range_absolute),
fov_range_relative=ds_cfg.get('fov_range_relative', self.fov_range_relative),
rng=rng,
)
transform_try = tgt_intrinsics_try @ R_try @ np.linalg.inv(raw_intrinsics)
probe = warp_perspective(
raw_finite_mask.astype(np.uint8), transform_try,
(probe_h, probe_w), interpolation='nearest',
)
ratio = float(probe.mean())
if ratio > best['ratio']:
best.update(ratio=ratio, tgt_intrinsics=tgt_intrinsics_try, R=R_try, transform=transform_try)
if ratio >= min_valid_after_warp:
break
tgt_intrinsics, R, transform = best['tgt_intrinsics'], best['R'], best['transform']
# Warp
# - Warp image
tgt_image = warp_perspective(raw_image, transform, tgt_size=(tgt_height, tgt_width), interpolation='lanczos')
# - Warp depth
depth_edge_mask = utils3d.np.depth_map_edge(raw_depth, mask=np.isfinite(raw_depth), kernel_size=5, ltol=0.01)
depth_bilinear_mask = np.isfinite(raw_depth) & ~depth_edge_mask
warped_depth_bilinear_mask = warp_perspective(depth_bilinear_mask.astype(np.float32), transform, (tgt_height, tgt_width), interpolation='bilinear')
warped_depth_nearest = warp_perspective(raw_depth, transform, (tgt_height, tgt_width), interpolation='nearest', sparse_mask=~np.isnan(raw_depth))
warped_depth_bilinear = 1 / warp_perspective(1 / raw_depth, transform, (tgt_height, tgt_width), interpolation='bilinear') # NOTE: Bilinear intepolation in disparity space maintains planar surfaces.
warped_depth = np.where(warped_depth_bilinear_mask == 1., warped_depth_bilinear, warped_depth_nearest)
# check if there is any zero in warped depth
if np.any(warped_depth == 0):
try:
print(f"Zero depth encountered for instance {instance['path']}. Dumping data.")
dump_path = self.workspace / 'failed_warp_dumps' / f"{instance['dataset']}_{instance['filename'].replace('/', '_')}.npz"
dump_path.parent.mkdir(parents=True, exist_ok=True)
np.savez_compressed(dump_path, raw_image=raw_image, raw_depth=raw_depth, transform=transform, tgt_size=(tgt_height, tgt_width), warped_depth=warped_depth)
except Exception as e:
print("Failed to dump warp data because of:", e)
# fix zeros
warped_depth = np.where(warped_depth > 0, warped_depth, np.nan)
tgt_uvhomo = np.concatenate([utils3d.np.uv_map((tgt_height, tgt_width)), np.ones((tgt_height, tgt_width, 1), dtype=np.float32)], axis=-1)
tgt_depth = warped_depth / np.dot(tgt_uvhomo, np.linalg.inv(transform)[2, :])
# - Warp normal
warped_normal = warp_perspective(raw_normal, transform, (tgt_height, tgt_width), interpolation='bilinear')
tgt_normal = warped_normal @ R.T
# always make sure that mask is not empty
if np.isfinite(tgt_depth).sum() / tgt_depth.size < 0.001:
tgt_depth = np.ones_like(tgt_depth)
instance['label_type'] = 'invalid'
# try:
# print(f"Insufficient valid depth after warping for instance {instance['path']}.")
# dump_path = self.workspace / 'insufficient_depths' / f"{instance['dataset']}_{instance['filename'].replace('/', '_')}.npz"
# dump_path.parent.mkdir(parents=True, exist_ok=True)
# np.savez_compressed(dump_path, raw_image=raw_image, raw_depth=raw_depth, transform=transform, tgt_size=(tgt_height, tgt_width), tgt_depth=tgt_depth, tgt_image=tgt_image)
# except Exception as e:
# print("Failed to dump insufficient depth data because of:", e)
# Flip augmentation
if rng.choice([True, False]):
tgt_image = np.flip(tgt_image, axis=1).copy()
tgt_depth = np.flip(tgt_depth, axis=1).copy()
tgt_normal = np.flip(tgt_normal, axis=1).copy() * [-1, 1, 1]
# NOTE: if cx != 0.5, flip intrinsics accordingly.
# Color augmentation
image_augmentation = self.datasets[instance['dataset']].get('image_augmentation', self.image_augmentation)
tgt_image = image_color_augmentation(
tgt_image,
augmentations=image_augmentation,
rng=rng,
depth=tgt_depth,
)
# Set metric flag.
# - Default: a dataset is metric iff it declares a `depth_unit` (depth is in a known
# metric unit), and `depth_unit` scales the raw depth to meters.
# - `metric_from_meta`: decide per-sample — only instances whose meta.json carried a
# `metric_scale`/`depth_scale` annotation (already applied in `_load_instance`) are
# metric; the rest are relative-scale (e.g. MegaDepth SfM samples without a recovered
# scale). `depth_unit`, if present, still applies as a unit conversion to all samples.
if depth_unit is not None:
tgt_depth *= depth_unit
if self.datasets[instance['dataset']].get('metric_from_meta', False):
instance['is_metric'] = bool(instance.get('has_metric_annotation', False))
else:
instance['is_metric'] = depth_unit is not None
# Clip maximum depth
max_depth = np.nanquantile(np.where(np.isfinite(tgt_depth), tgt_depth, np.nan), 0.01) * self.clamp_max_depth
tgt_depth = np.where(np.isfinite(tgt_depth), np.clip(tgt_depth, 0, max_depth), tgt_depth)
tgt_depth_mask_inf = np.isinf(tgt_depth)
if self.datasets[instance['dataset']].get('finite_depth_mask', None) == "only_known":
tgt_depth_mask_fin = np.isfinite(tgt_depth)
else:
tgt_depth_mask_fin = ~tgt_depth_mask_inf
instance.update({
'image': torch.from_numpy(tgt_image.astype(np.float32) / 255.0).permute(2, 0, 1),
'depth': torch.from_numpy(tgt_depth).float(),
'depth_mask_fin': torch.from_numpy(tgt_depth_mask_fin).bool(),
'depth_mask_inf': torch.from_numpy(tgt_depth_mask_inf).bool(),
"normal": torch.from_numpy(tgt_normal).float(),
'intrinsics': torch.from_numpy(tgt_intrinsics).float(),
})
except Exception as e:
traceback.print_exc()
print(f"Failed to process instance {instance['path']}: {e}")
instance.update(self._get_invalid_instance(torch_instance=True))
return instance
def _collate_batch(self, instances: List[Dict[str, Any]]):
try:
inst_w, inst_h = 256, 256
for instance in instances:
if instance['label_type'] != 'invalid':
inst_w, inst_h = instance['width'], instance['height']
break
for i in range(len(instances)):
if instances[i]['label_type'] == 'invalid':
print(f"Replacing invalid instance at index {i} with size ({inst_w}, {inst_h}). Instance: dataset={instances[i].get('dataset', 'N/A')}, filename={instances[i].get('filename', 'N/A')}")
instances[i].update(self._get_invalid_instance(torch_instance=True, height=inst_h, width=inst_w))
batch = {k: torch.stack([instance[k] for instance in instances], dim=0) for k in ['image', 'depth', 'depth_mask_fin', 'depth_mask_inf', 'normal', 'intrinsics']}
batch = {
'label_type': [instance['label_type'] for instance in instances],
'is_metric': [instance['is_metric'] for instance in instances],
'info': [{'dataset': instance['dataset'], 'filename': instance['filename']} for instance in instances],
**batch,
}
return batch
except Exception as e:
traceback.print_exc()
print(f"Failed to collate batch: {e}")
# show batch info and dump instances
try:
for instance in instances:
print(f" - Instance: dataset={instance.get('dataset', 'N/A')}, filename={instance.get('filename', 'N/A')}, label_type={instance.get('label_type', 'N/A')}")
# save
dump_path = Path('failed_instance_dumps', f"{instance.get('dataset', 'N/A')}_{instance.get('filename', 'N/A').replace('/', '_')}.npz")
dump_path.parent.mkdir(parents=True, exist_ok=True)
np.savez_compressed(dump_path, **{k: v.numpy() if isinstance(v, torch.Tensor) else v for k, v in instance.items()})
except Exception as e2:
traceback.print_exc()
print("Also failed to dump instances because of:", e2)
# return batch of invalid instances
batch_size = len(instances)
batch = {k: torch.stack([self._get_invalid_instance(torch_instance=True, height=inst_h, width=inst_w, gen_info=True)[k] for _ in range(batch_size)], dim=0) for k in ['image', 'depth', 'depth_mask_fin', 'depth_mask_inf', 'normal', 'intrinsics']}
batch = {
'label_type': ['invalid'] * batch_size,
'is_metric': [False] * batch_size,
'info': [{'dataset': 'invalid', 'filename': 'invalid'} for _ in range(batch_size)],
**batch,
}
return batch
def get(self) -> Dict[str, Union[torch.Tensor, str]]:
return self.pipeline.get()
def profile(self) -> str:
text = self.pipeline.profile()
grouper = getattr(self, '_batch_grouper', None)
if grouper is not None and grouper.num_incomplete_batches > 0:
text += (
f'\nDropped {grouper.num_incomplete_batches} incomplete batches '
f'({grouper.num_dropped_instances} instances) whose siblings were invalid'
)
return text
def start(self):
self.pipeline.start()
def stop(self):
self.pipeline.stop()
def __enter__(self):
self.start()
return self
def __exit__(self, exc_type, exc_value, traceback):
self.pipeline.stop()
return False
def get_dataset_sample_count(self) -> Dict[str, int]:
return self.dataset_sample_count