From 343bc2ba53bc9465633f6fc9dd499751f977e4de Mon Sep 17 00:00:00 2001 From: JeanGarf Date: Mon, 13 Jul 2026 01:27:56 +0200 Subject: [PATCH 001/116] Move node x/y position fields to the end of the edit form --- .../src/components/data/EditNode.tsx | 56 +++++++++---------- 1 file changed, 28 insertions(+), 28 deletions(-) diff --git a/packages/gephi-lite/src/components/data/EditNode.tsx b/packages/gephi-lite/src/components/data/EditNode.tsx index 1c60f407..3ec78550 100644 --- a/packages/gephi-lite/src/components/data/EditNode.tsx +++ b/packages/gephi-lite/src/components/data/EditNode.tsx @@ -171,34 +171,6 @@ const useEditNodeForm = ({ - {/* Rendering attributes */} -
-
- - -
-
- - -
-
- {/* Other attributes */}
{attributes.map((field, i) => ( @@ -232,6 +204,34 @@ const useEditNodeForm = ({
))} + + {/* Position */} +
+
+ + +
+
+ + +
+
), footer: ( From c4efda268027816c11259dad2d567aa6cd243268 Mon Sep 17 00:00:00 2001 From: JeanGarf Date: Mon, 13 Jul 2026 15:37:57 +0200 Subject: [PATCH 002/116] Add data creation menu to the Network view, above Spatialisation --- .../gephi-lite/src/views/graphPage/index.tsx | 51 +++++++++++++++++-- 1 file changed, 48 insertions(+), 3 deletions(-) diff --git a/packages/gephi-lite/src/views/graphPage/index.tsx b/packages/gephi-lite/src/views/graphPage/index.tsx index 4f24f36a..c01d496d 100644 --- a/packages/gephi-lite/src/views/graphPage/index.tsx +++ b/packages/gephi-lite/src/views/graphPage/index.tsx @@ -13,6 +13,8 @@ import { AppearanceIcon, AppearanceIconFill, CloseIcon, + DataCreationIcon, + DataCreationIconFill, FiltersIcon, FiltersIconFill, LayoutsIcon, @@ -23,6 +25,10 @@ import { MetricsIcon, MetricsIconFill, } from "../../components/common-icons"; +import { CreateScriptedFieldModelForm } from "../../components/data/CreateScriptedFieldModel"; +import { EditEdgeForm } from "../../components/data/EditEdge"; +import { EditFieldModelForm } from "../../components/data/EditFieldModel"; +import { EditNodeForm } from "../../components/data/EditNode"; import { LayoutQualityForm } from "../../components/forms/LayoutQualityForm"; import { useSelection, useSelectionActions } from "../../core/context/dataContexts"; import { LAYOUTS } from "../../core/layouts/collection"; @@ -36,7 +42,46 @@ import { LabelsPanel } from "./panels/LabelsPanel"; import { MetricsPanel } from "./panels/MetricsPanel"; import { LayoutPanel } from "./panels/layouts/LayoutPanel"; -const MENU: MenuItem<{ panel?: ComponentType }>[] = [ +type Panel = ComponentType<{ close: () => void }>; + +const MENU: MenuItem<{ panel?: Panel }>[] = [ + { + id: "data-creation", + i18nKey: "edition.data_creation", + icon: { normal: DataCreationIcon, fill: DataCreationIconFill }, + children: [ + { + id: "data-creation-node", + i18nKey: "edition.create_nodes", + panel: ({ close }) => , + }, + { + id: "data-creation-edge", + i18nKey: "edition.create_edges", + panel: ({ close }) => , + }, + { + id: "data-creation-node-field", + i18nKey: "edition.create_nodes_field", + panel: ({ close }) => , + }, + { + id: "data-creation-edge-field", + i18nKey: "edition.create_edges_field", + panel: ({ close }) => , + }, + { + id: "data-creation-node-scripted-field", + i18nKey: "edition.create_nodes_scripted_field", + panel: ({ close }) => , + }, + { + id: "data-creation-edge-scripted-field", + i18nKey: "edition.create_edges_scripted_field", + panel: ({ close }) => , + }, + ], + }, { id: "layout", i18nKey: "layouts.title", @@ -109,7 +154,7 @@ const MENU: MenuItem<{ panel?: ComponentType }>[] = [ ]; export const GraphPage: FC = () => { - const [selectedTool, setSelectedTool] = useState(undefined); + const [selectedTool, setSelectedTool] = useState(undefined); const { items } = useSelection(); const { emptySelection } = useSelectionActions(); const { t } = useTranslation(); @@ -193,7 +238,7 @@ export const GraphPage: FC = () => { > - + setSelectedTool(undefined)} /> )} From 229929c6f01b6d8545478a54ea310a0536d36e5f Mon Sep 17 00:00:00 2001 From: JeanGarf Date: Mon, 13 Jul 2026 15:59:23 +0200 Subject: [PATCH 003/116] Factor the duplicated data-creation menu into a shared constant --- CLAUDE.md | 4 ++ .../src/components/data/DataCreationMenu.tsx | 48 ++++++++++++++++++ .../gephi-lite/src/views/dataPage/index.tsx | 49 ++----------------- .../gephi-lite/src/views/graphPage/index.tsx | 49 ++----------------- 4 files changed, 58 insertions(+), 92 deletions(-) create mode 100644 CLAUDE.md create mode 100644 packages/gephi-lite/src/components/data/DataCreationMenu.tsx diff --git a/CLAUDE.md b/CLAUDE.md new file mode 100644 index 00000000..1958399f --- /dev/null +++ b/CLAUDE.md @@ -0,0 +1,4 @@ +# Instructions pour Claude Code + +- Lors des commits, ne jamais ajouter de ligne "Co-Authored-By:". +- Éviter la duplication de code : factoriser dans des fonctions ou des constantes partagées plutôt que copier-coller entre fichiers. diff --git a/packages/gephi-lite/src/components/data/DataCreationMenu.tsx b/packages/gephi-lite/src/components/data/DataCreationMenu.tsx new file mode 100644 index 00000000..3fb7a5a9 --- /dev/null +++ b/packages/gephi-lite/src/components/data/DataCreationMenu.tsx @@ -0,0 +1,48 @@ +import { ComponentType } from "react"; + +import { MenuItem } from "../SideMenu"; +import { DataCreationIcon, DataCreationIconFill } from "../common-icons"; +import { CreateScriptedFieldModelForm } from "./CreateScriptedFieldModel"; +import { EditEdgeForm } from "./EditEdge"; +import { EditFieldModelForm } from "./EditFieldModel"; +import { EditNodeForm } from "./EditNode"; + +export type Panel = ComponentType<{ close: () => void }>; + +export const DATA_CREATION_MENU_ITEM: MenuItem<{ panel?: Panel }> = { + id: "data-creation", + i18nKey: "edition.data_creation", + icon: { normal: DataCreationIcon, fill: DataCreationIconFill }, + children: [ + { + id: "data-creation-node", + i18nKey: "edition.create_nodes", + panel: ({ close }) => , + }, + { + id: "data-creation-edge", + i18nKey: "edition.create_edges", + panel: ({ close }) => , + }, + { + id: "data-creation-node-field", + i18nKey: "edition.create_nodes_field", + panel: ({ close }) => , + }, + { + id: "data-creation-edge-field", + i18nKey: "edition.create_edges_field", + panel: ({ close }) => , + }, + { + id: "data-creation-node-scripted-field", + i18nKey: "edition.create_nodes_scripted_field", + panel: ({ close }) => , + }, + { + id: "data-creation-edge-scripted-field", + i18nKey: "edition.create_edges_scripted_field", + panel: ({ close }) => , + }, + ], +}; diff --git a/packages/gephi-lite/src/views/dataPage/index.tsx b/packages/gephi-lite/src/views/dataPage/index.tsx index ece4ba40..f6798470 100644 --- a/packages/gephi-lite/src/views/dataPage/index.tsx +++ b/packages/gephi-lite/src/views/dataPage/index.tsx @@ -1,6 +1,6 @@ import { ItemType } from "@gephi/gephi-lite-sdk"; import cx from "classnames"; -import { type ComponentType, FC, ReactNode, useEffect, useMemo, useState } from "react"; +import { FC, ReactNode, useEffect, useMemo, useState } from "react"; import { Trans, useTranslation } from "react-i18next"; import { PiCaretDown, PiCaretRight } from "react-icons/pi"; import { ScrollSync } from "react-scroll-sync"; @@ -12,8 +12,6 @@ import { type MenuItem, SideMenu } from "../../components/SideMenu"; import Transition from "../../components/Transition"; import { CloseIcon, - DataCreationIcon, - DataCreationIconFill, FiltersIcon, FiltersIconFill, MenuCollapseIcon, @@ -22,10 +20,7 @@ import { MetricsIcon, MetricsIconFill, } from "../../components/common-icons"; -import { CreateScriptedFieldModelForm } from "../../components/data/CreateScriptedFieldModel"; -import { EditEdgeForm } from "../../components/data/EditEdge"; -import { EditFieldModelForm } from "../../components/data/EditFieldModel"; -import { EditNodeForm } from "../../components/data/EditNode"; +import { DATA_CREATION_MENU_ITEM, type Panel } from "../../components/data/DataCreationMenu"; import { useDataTable, useDataTableActions, @@ -44,46 +39,8 @@ import { Header } from "../layout/Header"; import { TopBar } from "./TopBar"; import { DataTable } from "./dataTable/DataTable"; -type Panel = ComponentType<{ close: () => void }>; - const MENU: MenuItem<{ panel?: Panel }>[] = [ - { - id: "data-creation", - i18nKey: "edition.data_creation", - icon: { normal: DataCreationIcon, fill: DataCreationIconFill }, - children: [ - { - id: "data-creation-node", - i18nKey: "edition.create_nodes", - panel: ({ close }) => , - }, - { - id: "data-creation-edge", - i18nKey: "edition.create_edges", - panel: ({ close }) => , - }, - { - id: "data-creation-node-field", - i18nKey: "edition.create_nodes_field", - panel: ({ close }) => , - }, - { - id: "data-creation-edge-field", - i18nKey: "edition.create_edges_field", - panel: ({ close }) => , - }, - { - id: "data-creation-node-scripted-field", - i18nKey: "edition.create_nodes_scripted_field", - panel: ({ close }) => , - }, - { - id: "data-creation-edge-scripted-field", - i18nKey: "edition.create_edges_scripted_field", - panel: ({ close }) => , - }, - ], - }, + DATA_CREATION_MENU_ITEM, { id: "filters", i18nKey: "filters.title", diff --git a/packages/gephi-lite/src/views/graphPage/index.tsx b/packages/gephi-lite/src/views/graphPage/index.tsx index c01d496d..71733449 100644 --- a/packages/gephi-lite/src/views/graphPage/index.tsx +++ b/packages/gephi-lite/src/views/graphPage/index.tsx @@ -1,5 +1,5 @@ import cx from "classnames"; -import { type ComponentType, FC, useEffect, useState } from "react"; +import { FC, useEffect, useState } from "react"; import { useTranslation } from "react-i18next"; import { PiX } from "react-icons/pi"; @@ -13,8 +13,6 @@ import { AppearanceIcon, AppearanceIconFill, CloseIcon, - DataCreationIcon, - DataCreationIconFill, FiltersIcon, FiltersIconFill, LayoutsIcon, @@ -25,10 +23,7 @@ import { MetricsIcon, MetricsIconFill, } from "../../components/common-icons"; -import { CreateScriptedFieldModelForm } from "../../components/data/CreateScriptedFieldModel"; -import { EditEdgeForm } from "../../components/data/EditEdge"; -import { EditFieldModelForm } from "../../components/data/EditFieldModel"; -import { EditNodeForm } from "../../components/data/EditNode"; +import { DATA_CREATION_MENU_ITEM, type Panel } from "../../components/data/DataCreationMenu"; import { LayoutQualityForm } from "../../components/forms/LayoutQualityForm"; import { useSelection, useSelectionActions } from "../../core/context/dataContexts"; import { LAYOUTS } from "../../core/layouts/collection"; @@ -42,46 +37,8 @@ import { LabelsPanel } from "./panels/LabelsPanel"; import { MetricsPanel } from "./panels/MetricsPanel"; import { LayoutPanel } from "./panels/layouts/LayoutPanel"; -type Panel = ComponentType<{ close: () => void }>; - const MENU: MenuItem<{ panel?: Panel }>[] = [ - { - id: "data-creation", - i18nKey: "edition.data_creation", - icon: { normal: DataCreationIcon, fill: DataCreationIconFill }, - children: [ - { - id: "data-creation-node", - i18nKey: "edition.create_nodes", - panel: ({ close }) => , - }, - { - id: "data-creation-edge", - i18nKey: "edition.create_edges", - panel: ({ close }) => , - }, - { - id: "data-creation-node-field", - i18nKey: "edition.create_nodes_field", - panel: ({ close }) => , - }, - { - id: "data-creation-edge-field", - i18nKey: "edition.create_edges_field", - panel: ({ close }) => , - }, - { - id: "data-creation-node-scripted-field", - i18nKey: "edition.create_nodes_scripted_field", - panel: ({ close }) => , - }, - { - id: "data-creation-edge-scripted-field", - i18nKey: "edition.create_edges_scripted_field", - panel: ({ close }) => , - }, - ], - }, + DATA_CREATION_MENU_ITEM, { id: "layout", i18nKey: "layouts.title", From b24706abbb97372ea894784a7a9ebf3375b43a85 Mon Sep 17 00:00:00 2001 From: JeanGarf Date: Mon, 13 Jul 2026 16:33:19 +0200 Subject: [PATCH 004/116] Update package-lock --- package-lock.json | 4357 +++++++++++++++++++++++++++++---------------- 1 file changed, 2819 insertions(+), 1538 deletions(-) diff --git a/package-lock.json b/package-lock.json index 5516ecb9..21946d04 100644 --- a/package-lock.json +++ b/package-lock.json @@ -42,32 +42,24 @@ "vitest": "^3.0.5" } }, - "node_modules/@ampproject/remapping": { - "version": "2.3.0", - "dev": true, - "license": "Apache-2.0", - "dependencies": { - "@jridgewell/gen-mapping": "^0.3.5", - "@jridgewell/trace-mapping": "^0.3.24" - }, - "engines": { - "node": ">=6.0.0" - } - }, "node_modules/@babel/code-frame": { - "version": "7.26.2", + "version": "7.29.7", + "resolved": "https://registry.npmjs.org/@babel/code-frame/-/code-frame-7.29.7.tgz", + "integrity": "sha512-Aup7aUOfpbAUg2ROOJN6Iw5f9DMBlzu0mIkm/malLQFN/YQgO48wCj0Kxa3sEHJvPVFg7siR+qRInwXd2qhQKw==", "license": "MIT", "dependencies": { - "@babel/helper-validator-identifier": "^7.25.9", + "@babel/helper-validator-identifier": "^7.29.7", "js-tokens": "^4.0.0", - "picocolors": "^1.0.0" + "picocolors": "^1.1.1" }, "engines": { "node": ">=6.9.0" } }, "node_modules/@babel/compat-data": { - "version": "7.26.5", + "version": "7.29.7", + "resolved": "https://registry.npmjs.org/@babel/compat-data/-/compat-data-7.29.7.tgz", + "integrity": "sha512-locTkQyKvwIEgBzVrn8693ebc97F2U8ZHjbXwDXJ5Fn2TCpNwTlKcaKLkdHop5c/icOFE7qt7Q9JC5hnKNa6Gg==", "dev": true, "license": "MIT", "engines": { @@ -75,20 +67,22 @@ } }, "node_modules/@babel/core": { - "version": "7.26.7", - "dev": true, - "license": "MIT", - "dependencies": { - "@ampproject/remapping": "^2.2.0", - "@babel/code-frame": "^7.26.2", - "@babel/generator": "^7.26.5", - "@babel/helper-compilation-targets": "^7.26.5", - "@babel/helper-module-transforms": "^7.26.0", - "@babel/helpers": "^7.26.7", - "@babel/parser": "^7.26.7", - "@babel/template": "^7.25.9", - "@babel/traverse": "^7.26.7", - "@babel/types": "^7.26.7", + "version": "7.29.7", + "resolved": "https://registry.npmjs.org/@babel/core/-/core-7.29.7.tgz", + "integrity": "sha512-RgHBCvtjbOK2gXSNBNIkNoEc9qoVEtau3hj8gEqKQuL3HZAibKarWFEI3Lfm6EYKkLalOh8eSrj9b+ch9H/VBA==", + "dev": true, + "license": "MIT", + "dependencies": { + "@babel/code-frame": "^7.29.7", + "@babel/generator": "^7.29.7", + "@babel/helper-compilation-targets": "^7.29.7", + "@babel/helper-module-transforms": "^7.29.7", + "@babel/helpers": "^7.29.7", + "@babel/parser": "^7.29.7", + "@babel/template": "^7.29.7", + "@babel/traverse": "^7.29.7", + "@babel/types": "^7.29.7", + "@jridgewell/remapping": "^2.3.5", "convert-source-map": "^2.0.0", "debug": "^4.1.0", "gensync": "^1.0.0-beta.2", @@ -104,13 +98,15 @@ } }, "node_modules/@babel/generator": { - "version": "7.26.5", + "version": "7.29.7", + "resolved": "https://registry.npmjs.org/@babel/generator/-/generator-7.29.7.tgz", + "integrity": "sha512-DkXD5OJQaAQIdZ1bt3UZdEnHAn9Imd3IVBdX03UFe+ony9Ojw5pzr9YVKGDY1jt+Gcn/FnGkNf8r+Vj5NOJWtQ==", "license": "MIT", "dependencies": { - "@babel/parser": "^7.26.5", - "@babel/types": "^7.26.5", - "@jridgewell/gen-mapping": "^0.3.5", - "@jridgewell/trace-mapping": "^0.3.25", + "@babel/parser": "^7.29.7", + "@babel/types": "^7.29.7", + "@jridgewell/gen-mapping": "^0.3.12", + "@jridgewell/trace-mapping": "^0.3.28", "jsesc": "^3.0.2" }, "engines": { @@ -129,12 +125,14 @@ } }, "node_modules/@babel/helper-compilation-targets": { - "version": "7.26.5", + "version": "7.29.7", + "resolved": "https://registry.npmjs.org/@babel/helper-compilation-targets/-/helper-compilation-targets-7.29.7.tgz", + "integrity": "sha512-wem6WaBj4NaVYVdNhLPPVacES6ZJ+KBBfSkTMD3YZxbP3rm3Di85tJU5ljaUNhaOynt+Aj0xruhYuzQBt8n71g==", "dev": true, "license": "MIT", "dependencies": { - "@babel/compat-data": "^7.26.5", - "@babel/helper-validator-option": "^7.25.9", + "@babel/compat-data": "^7.29.7", + "@babel/helper-validator-option": "^7.29.7", "browserslist": "^4.24.0", "lru-cache": "^5.1.1", "semver": "^6.3.1" @@ -194,6 +192,15 @@ "@babel/core": "^7.4.0 || ^8.0.0-0 <8.0.0" } }, + "node_modules/@babel/helper-globals": { + "version": "7.29.7", + "resolved": "https://registry.npmjs.org/@babel/helper-globals/-/helper-globals-7.29.7.tgz", + "integrity": "sha512-3nQVUAtvkKH9zahfWgw96Jc/uFOmjACE1kQz82E2lqWmHBgjzbNlsC22nuQTfahmWeQtTq5nQ/4Nnd2A1wj4zA==", + "license": "MIT", + "engines": { + "node": ">=6.9.0" + } + }, "node_modules/@babel/helper-member-expression-to-functions": { "version": "7.25.9", "dev": true, @@ -207,24 +214,28 @@ } }, "node_modules/@babel/helper-module-imports": { - "version": "7.25.9", + "version": "7.29.7", + "resolved": "https://registry.npmjs.org/@babel/helper-module-imports/-/helper-module-imports-7.29.7.tgz", + "integrity": "sha512-ejHwrQQYcm9xnTivShn2IDOlIzInN34AXskvq9QicvCtEzq1Vzclu/tKF8Jq1Cg8JG2GL6/EmjgsCT7lXepE3g==", "license": "MIT", "dependencies": { - "@babel/traverse": "^7.25.9", - "@babel/types": "^7.25.9" + "@babel/traverse": "^7.29.7", + "@babel/types": "^7.29.7" }, "engines": { "node": ">=6.9.0" } }, "node_modules/@babel/helper-module-transforms": { - "version": "7.26.0", + "version": "7.29.7", + "resolved": "https://registry.npmjs.org/@babel/helper-module-transforms/-/helper-module-transforms-7.29.7.tgz", + "integrity": "sha512-UPUVSyXbOh627KiCIGQSgwWzGeBKLkaJ9PJEdrngIwMSzxLR4jS4+f1f1jb7VzBbg8nFLaYotvVPFCTqdrmTAg==", "dev": true, "license": "MIT", "dependencies": { - "@babel/helper-module-imports": "^7.25.9", - "@babel/helper-validator-identifier": "^7.25.9", - "@babel/traverse": "^7.25.9" + "@babel/helper-module-imports": "^7.29.7", + "@babel/helper-validator-identifier": "^7.29.7", + "@babel/traverse": "^7.29.7" }, "engines": { "node": ">=6.9.0" @@ -245,7 +256,9 @@ } }, "node_modules/@babel/helper-plugin-utils": { - "version": "7.26.5", + "version": "7.29.7", + "resolved": "https://registry.npmjs.org/@babel/helper-plugin-utils/-/helper-plugin-utils-7.29.7.tgz", + "integrity": "sha512-G7sHYigPY17oO5SYWnfD/0MTBwVR781S/JI643e/JhUYgVgWE/61SoW3NH9KWUKyKq5LVh3npif99Wkt6j86Jw==", "dev": true, "license": "MIT", "engines": { @@ -297,21 +310,27 @@ } }, "node_modules/@babel/helper-string-parser": { - 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"2.4.3", + "resolved": "https://registry.npmjs.org/write-file-atomic/-/write-file-atomic-2.4.3.tgz", + "integrity": "sha512-GaETH5wwsX+GcnzhPgKcKjJ6M2Cq3/iZp1WyY/X1CSqrW+jVNM9Y7D8EC2sM4ZG/V8wZlSniJnCKWPmBYAucRQ==", "dev": true, "license": "ISC", "dependencies": { @@ -19881,6 +21160,8 @@ }, "node_modules/write-pkg": { "version": "4.0.0", + "resolved": "https://registry.npmjs.org/write-pkg/-/write-pkg-4.0.0.tgz", + "integrity": "sha512-v2UQ+50TNf2rNHJ8NyWttfm/EJUBWMJcx6ZTYZr6Qp52uuegWw/lBkCtCbnYZEmPRNL61m+u67dAmGxo+HTULA==", "dev": true, "license": "MIT", "dependencies": { @@ -19894,6 +21175,8 @@ }, "node_modules/write-pkg/node_modules/type-fest": { "version": "0.4.1", + "resolved": "https://registry.npmjs.org/type-fest/-/type-fest-0.4.1.tgz", + "integrity": "sha512-IwzA/LSfD2vC1/YDYMv/zHP4rDF1usCwllsDpbolT3D4fUepIO7f9K70jjmUewU/LmGUKJcwcVtDCpnKk4BPMw==", "dev": true, "license": "(MIT OR CC0-1.0)", "engines": { @@ -19901,7 +21184,9 @@ } }, "node_modules/ws": { - "version": "8.18.0", + "version": "8.21.0", + "resolved": "https://registry.npmjs.org/ws/-/ws-8.21.0.tgz", + "integrity": "sha512-Vsp28b7DRcimFQvrqu2Wek3z1iYxDCWqHYB8Qsnk/S4RfaCQzPGPyBNuVjJV3cd6UiKtUtp6sNM77gWvzcCH+g==", "dev": true, "license": "MIT", "engines": { @@ -19929,6 +21214,8 @@ }, "node_modules/xtend": { "version": "4.0.2", + "resolved": "https://registry.npmjs.org/xtend/-/xtend-4.0.2.tgz", + "integrity": "sha512-LKYU1iAXJXUgAXn9URjiu+MWhyUXHsvfp7mcuYm9dSUKK0/CjtrUwFAxD82/mCWbtLsGjFIad0wIsod4zrTAEQ==", "dev": true, "license": "MIT", "engines": { @@ -19948,17 +21235,6 @@ "dev": true, "license": "ISC" }, - "node_modules/yaml": { - "version": "2.7.0", - "dev": true, - "license": "ISC", - "bin": { - "yaml": "bin.mjs" - }, - "engines": { - "node": ">= 14" - } - }, "node_modules/yargs": { "version": "17.7.2", "dev": true, @@ -20208,15 +21484,20 @@ "graphology-types": ">=0.24.0" } }, - "packages/gephi-lite/node_modules/immutable": { - "version": "4.3.7", - "dev": true, - "license": "MIT" - }, "packages/gephi-lite/node_modules/linkify-it": { - "version": "5.0.0", - "resolved": "https://registry.npmjs.org/linkify-it/-/linkify-it-5.0.0.tgz", - "integrity": "sha512-5aHCbzQRADcdP+ATqnDuhhJ/MRIqDkZX5pyjFHRRysS8vZ5AbqGEoFIb6pYHPZ+L/OC2Lc+xT8uHVVR5CAK/wQ==", + "version": "5.0.2", + "resolved": "https://registry.npmjs.org/linkify-it/-/linkify-it-5.0.2.tgz", + "integrity": "sha512-ONTm2jCMAVZjgQa/Fy1kScXsuOoF5NPTsoFBdE1KVIZ2vAh/r9+Bqo+0jINCBYnavTPQZz38QzFTme79ENoN3Q==", + "funding": [ + { + "type": "github", + "url": "https://github.com/sponsors/puzrin" + }, + { + "type": "github", + "url": "https://github.com/sponsors/markdown-it" + } + ], "license": "MIT", "dependencies": { "uc.micro": "^2.0.0" From 8da1754799db61df7cac79e4a41988cf706a9b08 Mon Sep 17 00:00:00 2001 From: JeanGarf Date: Mon, 13 Jul 2026 17:36:02 +0200 Subject: [PATCH 005/116] Search edges by their source/target node labels, not just internal IDs --- packages/gephi-lite/src/utils/search.ts | 2 ++ packages/gephi-lite/src/views/dataPage/index.tsx | 6 +++++- 2 files changed, 7 insertions(+), 1 deletion(-) diff --git a/packages/gephi-lite/src/utils/search.ts b/packages/gephi-lite/src/utils/search.ts index bf1472fd..587f3a0e 100644 --- a/packages/gephi-lite/src/utils/search.ts +++ b/packages/gephi-lite/src/utils/search.ts @@ -12,12 +12,14 @@ export function doesItemMatch( data: ItemData, fields: FieldModel[], query: string, + extraLabels: (string | null | undefined)[] = [], ): boolean { const normalizedQuery = normalize(query); return ( normalize(id).includes(normalizedQuery) || (label && normalize(label).includes(normalizedQuery)) || + extraLabels.some((extraLabel) => extraLabel && normalize(extraLabel).includes(normalizedQuery)) || fields.some( ({ type, id }) => SEARCHABLE_TYPES.has(type) && typeof data[id] === "string" && normalize(data[id]).includes(normalizedQuery), diff --git a/packages/gephi-lite/src/views/dataPage/index.tsx b/packages/gephi-lite/src/views/dataPage/index.tsx index f6798470..c1de9390 100644 --- a/packages/gephi-lite/src/views/dataPage/index.tsx +++ b/packages/gephi-lite/src/views/dataPage/index.tsx @@ -123,10 +123,14 @@ export const DataPage: FC<{ type: ItemType }> = ({ type: inputType }) => { const allData = mergeStaticDynamicData(data, dynamicData); const getLabel = type === "nodes" ? getNodeLabel : getEdgeLabel; const fields = type === "nodes" ? nodeFields : edgeFields; + const nodeAllData = type === "edges" ? mergeStaticDynamicData(nodeData, dynamicNodeData) : null; if (search) { allIDs.forEach((id) => { const label = getLabel?.(allData[id]); - if (doesItemMatch(id, label, data[id], fields, search)) { + const extremityLabels = nodeAllData + ? [getNodeLabel?.(nodeAllData[graph.source(id)]), getNodeLabel?.(nodeAllData[graph.target(id)])] + : []; + if (doesItemMatch(id, label, data[id], fields, search, extremityLabels)) { matchingItems.push(id); } else { otherItems.push(id); From f557ddcc0b656e92f3e5517b02fb3e290129bda6 Mon Sep 17 00:00:00 2001 From: JeanGarf Date: Mon, 13 Jul 2026 18:00:24 +0200 Subject: [PATCH 006/116] Add Source/Target label columns and move ID columns to the end in the Edge data view --- packages/gephi-lite/src/locales/dev.json | 4 +- .../src/views/dataPage/dataTable/consts.tsx | 2 + .../dataTable/useDataTableColumns.tsx | 72 ++++++++++++++++--- 3 files changed, 66 insertions(+), 12 deletions(-) diff --git a/packages/gephi-lite/src/locales/dev.json b/packages/gephi-lite/src/locales/dev.json index ae548785..93512965 100644 --- a/packages/gephi-lite/src/locales/dev.json +++ b/packages/gephi-lite/src/locales/dev.json @@ -176,7 +176,9 @@ "preview": "Preview", "selected": "Selected?", "sourceId": "Source ID", - "targetId": "Target ID" + "sourceLabel": "Source label", + "targetId": "Target ID", + "targetLabel": "Target label" }, "save_and_create_column": "Save and create column", "save_cell": "Save cell", diff --git a/packages/gephi-lite/src/views/dataPage/dataTable/consts.tsx b/packages/gephi-lite/src/views/dataPage/dataTable/consts.tsx index 37503ca9..fcbbaad5 100644 --- a/packages/gephi-lite/src/views/dataPage/dataTable/consts.tsx +++ b/packages/gephi-lite/src/views/dataPage/dataTable/consts.tsx @@ -16,6 +16,8 @@ export const SPECIFIC_COLUMNS = { preview: "preview", sourceId: "sourceId", targetId: "targetId", + sourceLabel: "sourceLabel", + targetLabel: "targetLabel", // add dynamic ...mapValues(DYNAMIC_ATTRIBUTES.nodes, identity), ...mapValues(DYNAMIC_ATTRIBUTES.edges, identity), diff --git a/packages/gephi-lite/src/views/dataPage/dataTable/useDataTableColumns.tsx b/packages/gephi-lite/src/views/dataPage/dataTable/useDataTableColumns.tsx index 52835403..9bdf1b05 100644 --- a/packages/gephi-lite/src/views/dataPage/dataTable/useDataTableColumns.tsx +++ b/packages/gephi-lite/src/views/dataPage/dataTable/useDataTableColumns.tsx @@ -14,22 +14,27 @@ import ConfirmModal from "../../../components/modals/ConfirmModal"; import { useDataTable, useDataTableActions, + useDynamicItemData, useGraphDataset, useGraphDatasetActions, useSelectionActions, + useVisualGetters, } from "../../../core/context/dataContexts"; -import { DYNAMIC_ATTRIBUTES } from "../../../core/graph/dynamicAttributes"; +import { DYNAMIC_ATTRIBUTES, mergeStaticDynamicData } from "../../../core/graph/dynamicAttributes"; import { useModal } from "../../../core/modals"; import { useMobile } from "../../../hooks/useMobile"; import { DataCell } from "./DataCell"; -import { Arrow, ItemRow, SPECIFIC_COLUMNS } from "./consts"; +import { Arrow, EdgeItemRow, ItemRow, SPECIFIC_COLUMNS } from "./consts"; export const useDataTableColumns = (itemIDs: string[]) => { const { t } = useTranslation(); const { type } = useDataTable(); const { openModal } = useModal(); const { nodeFields, edgeFields, nodeData, edgeData, fullGraph } = useGraphDataset(); + const { dynamicNodeData } = useDynamicItemData(); + const { getNodeLabel } = useVisualGetters(); const isMobile = useMobile(); + const nodeAllData = useMemo(() => mergeStaticDynamicData(nodeData, dynamicNodeData), [nodeData, dynamicNodeData]); const { setSort } = useDataTableActions(); const { toggle, select, unselect } = useSelectionActions(); @@ -108,6 +113,41 @@ export const useDataTableColumns = (itemIDs: string[]) => { }, [t, type], ); + const getExtremityLabelColumn = useCallback( + (extremity: "sourceId" | "targetId", field: "sourceLabel" | "targetLabel"): ColumnDef => { + return { + id: field, + accessorFn: (row) => { + const nodeId = (row as EdgeItemRow)[extremity]; + return (getNodeLabel && getNodeLabel(nodeAllData[nodeId])) || nodeId; + }, + cell: (props) => {props.row.getValue(field)}, + meta: { + protected: true, + }, + header: ({ header }) => ( + <> + + {t(`datatable.protected_columns.${field}`)} + + + ( +
+ +
+ )} + /> + + ), + size: 180, + }; + }, + [t, getNodeLabel, nodeAllData], + ); const columns = useMemo[]>( () => [ // Agnostic columns; @@ -181,17 +221,17 @@ export const useDataTableColumns = (itemIDs: string[]) => { ), }), + // Source/target node labels, right after the preview column: + ...(type === "edges" + ? [getExtremityLabelColumn("sourceId", "sourceLabel"), getExtremityLabelColumn("targetId", "targetLabel")] + : []), + // Type specific dynamic / read-only columns: - getSpecificRow("id"), ...(type === "nodes" - ? values(DYNAMIC_ATTRIBUTES.nodes).map((f) => getDynamicColumn(f)) - : [ - getSpecificRow(SPECIFIC_COLUMNS.sourceId as keyof ItemRow), - getSpecificRow(SPECIFIC_COLUMNS.targetId as keyof ItemRow), - ...values(DYNAMIC_ATTRIBUTES.edges) - .filter((f) => (isBoolean(f.showInDataTable) ? f.showInDataTable : f.showInDataTable(fullGraph))) - .map((f) => getDynamicColumn(f)), - ]), + ? [getSpecificRow("id"), ...values(DYNAMIC_ATTRIBUTES.nodes).map((f) => getDynamicColumn(f))] + : values(DYNAMIC_ATTRIBUTES.edges) + .filter((f) => (isBoolean(f.showInDataTable) ? f.showInDataTable : f.showInDataTable(fullGraph))) + .map((f) => getDynamicColumn(f))), // Dataset-specific columns; ...fields.map>((field, i, a) => ({ @@ -316,11 +356,21 @@ export const useDataTableColumns = (itemIDs: string[]) => { /> ), })), + + // For edges, id/source/target are pushed to the very end: + ...(type === "edges" + ? [ + getSpecificRow("id"), + getSpecificRow(SPECIFIC_COLUMNS.sourceId as keyof ItemRow), + getSpecificRow(SPECIFIC_COLUMNS.targetId as keyof ItemRow), + ] + : []), ], [ columnHelper, isMobile, getSpecificRow, + getExtremityLabelColumn, type, fields, select, From a164ef6bb50ecb2168181c96507f4bf374770d35 Mon Sep 17 00:00:00 2001 From: JeanGarf Date: Mon, 13 Jul 2026 18:05:25 +0200 Subject: [PATCH 007/116] Move the ID column to the end in the Node data view too --- .../views/dataPage/dataTable/useDataTableColumns.tsx | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/packages/gephi-lite/src/views/dataPage/dataTable/useDataTableColumns.tsx b/packages/gephi-lite/src/views/dataPage/dataTable/useDataTableColumns.tsx index 9bdf1b05..0cd8c16d 100644 --- a/packages/gephi-lite/src/views/dataPage/dataTable/useDataTableColumns.tsx +++ b/packages/gephi-lite/src/views/dataPage/dataTable/useDataTableColumns.tsx @@ -228,7 +228,7 @@ export const useDataTableColumns = (itemIDs: string[]) => { // Type specific dynamic / read-only columns: ...(type === "nodes" - ? [getSpecificRow("id"), ...values(DYNAMIC_ATTRIBUTES.nodes).map((f) => getDynamicColumn(f))] + ? values(DYNAMIC_ATTRIBUTES.nodes).map((f) => getDynamicColumn(f)) : values(DYNAMIC_ATTRIBUTES.edges) .filter((f) => (isBoolean(f.showInDataTable) ? f.showInDataTable : f.showInDataTable(fullGraph))) .map((f) => getDynamicColumn(f))), @@ -357,14 +357,14 @@ export const useDataTableColumns = (itemIDs: string[]) => { ), })), - // For edges, id/source/target are pushed to the very end: - ...(type === "edges" - ? [ + // ID (and, for edges, source/target) are pushed to the very end: + ...(type === "nodes" + ? [getSpecificRow("id")] + : [ getSpecificRow("id"), getSpecificRow(SPECIFIC_COLUMNS.sourceId as keyof ItemRow), getSpecificRow(SPECIFIC_COLUMNS.targetId as keyof ItemRow), - ] - : []), + ]), ], [ columnHelper, From f336f8724d88514cb4d7e1a8e7b09cf98cfe8352 Mon Sep 17 00:00:00 2001 From: JeanGarf Date: Mon, 13 Jul 2026 20:00:39 +0200 Subject: [PATCH 008/116] Refresh the filtered graph cache when node/edge data changes, not just on fullGraph reference changes --- packages/gephi-lite/src/core/graph/index.ts | 12 ++++++++++-- 1 file changed, 10 insertions(+), 2 deletions(-) diff --git a/packages/gephi-lite/src/core/graph/index.ts b/packages/gephi-lite/src/core/graph/index.ts index 5bafaef3..32b3de26 100644 --- a/packages/gephi-lite/src/core/graph/index.ts +++ b/packages/gephi-lite/src/core/graph/index.ts @@ -517,8 +517,16 @@ graphDatasetAtom.bind((graphDataset, previousGraphDataset) => { ), ); - // When the fullGraph ref changes, reindex everything: - if (updatedKeys.has("fullGraph") || updatedKeys.has("layout")) { + // When the graph content changes, reindex everything: + // (note: fullGraph is mutated in place by most producers, so its reference rarely + // changes; nodeData/edgeData always get a fresh reference on every edit, so we rely + // on those too, to avoid the filtered graph cache going stale after edits.) + if ( + updatedKeys.has("fullGraph") || + updatedKeys.has("layout") || + updatedKeys.has("nodeData") || + updatedKeys.has("edgeData") + ) { const filtersState = filtersAtom.get(); const newCache = applyFilters(graphDataset, filtersState.filters, [], topologicalFiltersAtom.get()); filteredGraphsAtom.set(newCache); From ce7f614930c178438c72d0321297bf4c674ff2e9 Mon Sep 17 00:00:00 2001 From: JeanGarf Date: Mon, 13 Jul 2026 21:07:27 +0200 Subject: [PATCH 009/116] Support changing edge extremities via updateEdge, and fix stale graph/selection refresh after an edge edit --- packages/gephi-lite/src/core/graph/index.ts | 28 +++++++++++++------ .../src/views/graphPage/Selection.tsx | 8 ++++-- 2 files changed, 25 insertions(+), 11 deletions(-) diff --git a/packages/gephi-lite/src/core/graph/index.ts b/packages/gephi-lite/src/core/graph/index.ts index 5bafaef3..a1d57dd8 100644 --- a/packages/gephi-lite/src/core/graph/index.ts +++ b/packages/gephi-lite/src/core/graph/index.ts @@ -348,26 +348,32 @@ const updateNode: MultiProducer<[GraphDataset, SearchState], [string, Attributes }; const updateEdge: MultiProducer< [GraphDataset, SearchState], - [string, Attributes, { merge?: boolean; directed?: boolean }?] -> = (edge, attributes, { merge, directed } = {}) => { + [string, Attributes, { merge?: boolean; directed?: boolean; source?: string; target?: string }?] +> = (edge, attributes, { merge, directed, source, target } = {}) => { return [ (state) => { const { data } = cleanEdge(edge, merge ? { ...state.edgeData[edge], ...attributes } : attributes); const newEdgeFieldModel = newItemModel<"edges">("edges", data, state.edgeFields); - // Validate new edge direction: + // Validate new edge direction and extremities: let fullGraph = state.fullGraph; const graphType = fullGraph.type; const newDirected = graphType === "mixed" ? directed : graphType === "directed"; + const newSource = source ?? fullGraph.source(edge); + const newTarget = target ?? fullGraph.target(edge); + const directionChanges = !isNil(newDirected) && fullGraph.isDirected(edge) !== directed; + const extremitiesChange = newSource !== fullGraph.source(edge) || newTarget !== fullGraph.target(edge); - if (!isNil(newDirected) && fullGraph.isDirected(edge) !== directed) { + if (directionChanges || extremitiesChange) { const newFullGraph = fullGraph.emptyCopy(); - fullGraph.forEachEdge((e, _, source, target) => { - const isEdgeDirected = e === edge ? newDirected : fullGraph.isDirected(e); + fullGraph.forEachEdge((e, _, edgeSource, edgeTarget) => { + const isCurrentEdge = e === edge; + const isEdgeDirected = isCurrentEdge && directionChanges ? newDirected : fullGraph.isDirected(e); + const [s, t] = isCurrentEdge ? [newSource, newTarget] : [edgeSource, edgeTarget]; if (isEdgeDirected) { - newFullGraph.addDirectedEdgeWithKey(e, source, target); + newFullGraph.addDirectedEdgeWithKey(e, s, t); } else { - newFullGraph.addUndirectedEdgeWithKey(e, source, target); + newFullGraph.addUndirectedEdgeWithKey(e, s, t); } }); fullGraph = newFullGraph; @@ -433,7 +439,11 @@ export const filteredGraphsAtom = atom([]); export const filteredGraphAtom = derivedAtom( [filteredGraphsAtom, graphDatasetAtom], (filteredGraphCache, graphDataset) => last(filteredGraphCache)?.graph || graphDataset.fullGraph, - { checkInput: false }, + // checkOutput must stay disabled: the output is a mutable graphology graph, and a deep + // isEqual comparison can wrongly report "no change" (e.g. after an edge source/target + // swap, where nodes and edge keys are unchanged), leaving downstream atoms — and the + // Sigma rendering — stuck on a stale graph. + { checkInput: false, checkOutput: false }, ); export const useFilteredGraphAt = (index: number) => { const graphDataset = useGraphDataset(); diff --git a/packages/gephi-lite/src/views/graphPage/Selection.tsx b/packages/gephi-lite/src/views/graphPage/Selection.tsx index a06ecacc..3c04b0ae 100644 --- a/packages/gephi-lite/src/views/graphPage/Selection.tsx +++ b/packages/gephi-lite/src/views/graphPage/Selection.tsx @@ -104,9 +104,13 @@ function SelectedItem< const mergedStaticDynamicNodeData = !item.hidden && sigmaGraph.hasEdge(id) ? {} : mergeStaticDynamicData(nodeData, dynamicNodeData); + // Node identity is always read from fullGraph (the source of truth, which gets a fresh + // reference on every edit and re-renders this panel); the rendered attributes come from + // sigmaGraph when the edge is visible. Reading identity from sigmaGraph would leave the + // panel stale after an edge edit, since sigmaGraph keeps a stable reference. const source = !item.hidden && sigmaGraph.hasEdge(id) - ? sigmaGraph.getNodeAttributes(sigmaGraph.source(id)) + ? sigmaGraph.getNodeAttributes(fullGraph.source(id)) : getItemAttributes( "nodes", fullGraph.source(id), @@ -117,7 +121,7 @@ function SelectedItem< ); const target = !item.hidden && sigmaGraph.hasEdge(id) - ? sigmaGraph.getNodeAttributes(sigmaGraph.target(id)) + ? sigmaGraph.getNodeAttributes(fullGraph.target(id)) : getItemAttributes( "nodes", fullGraph.target(id), From 551760dbb6d49bdd8bb260b084274f01d9311eb4 Mon Sep 17 00:00:00 2001 From: JeanGarf Date: Mon, 13 Jul 2026 21:07:36 +0200 Subject: [PATCH 010/116] Add a button to swap edge source/target in the edit form --- .../src/components/common-icons.tsx | 2 ++ .../src/components/data/EditEdge.tsx | 20 +++++++++++++++++-- packages/gephi-lite/src/locales/dev.json | 1 + 3 files changed, 21 insertions(+), 2 deletions(-) diff --git a/packages/gephi-lite/src/components/common-icons.tsx b/packages/gephi-lite/src/components/common-icons.tsx index c77786e5..6c9f1eaf 100644 --- a/packages/gephi-lite/src/components/common-icons.tsx +++ b/packages/gephi-lite/src/components/common-icons.tsx @@ -9,6 +9,7 @@ import { PiArrowSquareOut, PiArrowsClockwise, PiArrowsInSimple, + PiArrowsLeftRight, PiBinary, PiBinaryBold, PiBug, @@ -156,6 +157,7 @@ export const SearchIcon = PiMagnifyingGlass; export const SettingsIcon = PiGear; export const StopIcon = PiStop; export const StopIconFill = PiStopFill; +export const SwapIcon = PiArrowsLeftRight; export const SyncIcon = PiArrowsClockwise; export const ThreeDotsVerticalIcon = PiDotsThreeVerticalBold; export const TrashIcon = PiTrash; diff --git a/packages/gephi-lite/src/components/data/EditEdge.tsx b/packages/gephi-lite/src/components/data/EditEdge.tsx index 46d970d8..1e7247f3 100644 --- a/packages/gephi-lite/src/components/data/EditEdge.tsx +++ b/packages/gephi-lite/src/components/data/EditEdge.tsx @@ -11,7 +11,7 @@ import { ModalProps } from "../../core/modals/types"; import { useNotifications } from "../../core/notifications"; import { Scalar } from "../../core/types"; import { GraphSearch } from "../GraphSearch"; -import { CancelIcon, FieldModelIcon } from "../common-icons"; +import { CancelIcon, FieldModelIcon, SwapIcon } from "../common-icons"; import { Select } from "../forms/Select"; import { Modal } from "../modals"; import { EditItemAttribute } from "./Attribute"; @@ -73,6 +73,7 @@ const useEditEdgeForm = ({ handleSubmit, control, setValue, + getValues, watch, formState: { errors }, } = useForm({ @@ -134,7 +135,7 @@ const useEditEdgeForm = ({ // Update existing edge: else { try { - updateEdge(id, allAttributes, { directed: data.isDirected }); + updateEdge(id, allAttributes, { directed: data.isDirected, source: data.source, target: data.target }); select({ type: "edges", items: new Set([id]), replace: true }); notify({ type: "success", @@ -208,6 +209,21 @@ const useEditEdgeForm = ({ /> {errors.source &&
{t(`error.form.${errors.source.type}`)}
} +
+ +
+ + {/* ID */} +
+
+ + !isNew || (!!value && !nodeData[value]) || (!value && isNew), + })} + /> + {errors.id && ( +
+ {t(`error.form.${errors.id.type === "validate" ? "unique" : errors.id.type}`)} +
+ )} +
+
), footer: ( From fc4ded5badc01513ccc93daa91f158dcaaf4aaca Mon Sep 17 00:00:00 2001 From: JeanGarf Date: Mon, 13 Jul 2026 23:29:36 +0200 Subject: [PATCH 014/116] Move Node ID/Edge ID to the end of the attribute list in the Graph view selection panel --- packages/gephi-lite/src/views/graphPage/Selection.tsx | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/packages/gephi-lite/src/views/graphPage/Selection.tsx b/packages/gephi-lite/src/views/graphPage/Selection.tsx index a06ecacc..d8635a61 100644 --- a/packages/gephi-lite/src/views/graphPage/Selection.tsx +++ b/packages/gephi-lite/src/views/graphPage/Selection.tsx @@ -75,7 +75,6 @@ function SelectedItem< const attributes = useMemo<{ label: ReactNode; value: Scalar; field?: FieldModel }[]>( () => [ - { label: t(`graph.model.${type}-data.id`), value: id }, ...fields.map((field) => ({ label: staticDynamicAttributeLabel(field), field, @@ -91,6 +90,7 @@ function SelectedItem< value, field: { type: "number", id: key, itemType: type } as FieldModel, })), + { label: t(`graph.model.${type}-data.id`), value: id }, ], [data.dynamic, data.static, fields, id, renderingData, t, type], ); From 5e47aa246c60c64b9827cb288b72df5c61bca6f1 Mon Sep 17 00:00:00 2001 From: JeanGarf Date: Mon, 13 Jul 2026 23:51:39 +0200 Subject: [PATCH 015/116] Configure GitHub Pages deployment for this fork Remove the CNAME pointing to the upstream lite.gephi.org domain, switch redirect URLs to relative paths, trigger deploy-app on push to main_jg instead of main (kept in sync with upstream), and disable the automatic Docker Hub publish workflow. --- .github/workflows/deploy-app.yml | 12 ++++-------- .github/workflows/deploy-docker.yml | 3 --- CNAME | 1 - 3 files changed, 4 insertions(+), 12 deletions(-) delete mode 100644 CNAME diff --git a/.github/workflows/deploy-app.yml b/.github/workflows/deploy-app.yml index a414e69b..acc311bc 100644 --- a/.github/workflows/deploy-app.yml +++ b/.github/workflows/deploy-app.yml @@ -2,7 +2,7 @@ name: deploy-app on: push: branches: - - main + - main_jg workflow_dispatch: jobs: @@ -41,9 +41,6 @@ jobs: - name: Copy gephi lite files run: cp -rf packages/gephi-lite/build/* website/v${{ env.PACKAGE_VERSION }} - - name: Copy CNAME files - run: cp CNAME website/CNAME - - name: Create index page with redirection run: | cat < website/index.html @@ -56,16 +53,15 @@ jobs: - - If you are not redirected automatically, follow this link. + If you are not redirected automatically, follow this link. EOF diff --git a/.github/workflows/deploy-docker.yml b/.github/workflows/deploy-docker.yml index 1af039f1..b426a704 100644 --- a/.github/workflows/deploy-docker.yml +++ b/.github/workflows/deploy-docker.yml @@ -1,8 +1,5 @@ name: Publish Docker image on: - push: - branches: - - main workflow_dispatch: env: diff --git a/CNAME b/CNAME deleted file mode 100644 index cf8cb511..00000000 --- a/CNAME +++ /dev/null @@ -1 +0,0 @@ -lite.gephi.org \ No newline at end of file From d10ae50d0bbc90a0c13fb8e5f6f15df3045fc61f Mon Sep 17 00:00:00 2001 From: JeanGarf Date: Tue, 14 Jul 2026 00:07:29 +0200 Subject: [PATCH 016/116] Grant contents:write permission to deploy-app workflow --- .github/workflows/deploy-app.yml | 2 ++ 1 file changed, 2 insertions(+) diff --git a/.github/workflows/deploy-app.yml b/.github/workflows/deploy-app.yml index acc311bc..ad7549cf 100644 --- a/.github/workflows/deploy-app.yml +++ b/.github/workflows/deploy-app.yml @@ -8,6 +8,8 @@ on: jobs: deploy: runs-on: ubuntu-latest + permissions: + contents: write env: CI: false VITE_GITHUB_PROXY: "https://githubapi.gephi.org" From 89102f4d782ea78637d9312cdbad152366dbba5b Mon Sep 17 00:00:00 2001 From: Claude Date: Tue, 14 Jul 2026 12:45:42 +0000 Subject: [PATCH 017/116] =?UTF-8?q?Ajout=20d'une=20ic=C3=B4ne=20pour=20s?= =?UTF-8?q?=C3=A9lectionner=20les=20edges=20d'un=20n=C5=93ud?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- packages/gephi-lite/src/components/common-icons.tsx | 1 + packages/gephi-lite/src/locales/dev.json | 1 + packages/gephi-lite/src/locales/en.json | 1 + packages/gephi-lite/src/locales/fr.json | 1 + packages/gephi-lite/src/locales/hu.json | 1 + packages/gephi-lite/src/locales/ko.json | 1 + packages/gephi-lite/src/locales/uk.json | 1 + .../gephi-lite/src/views/graphPage/Selection.tsx | 13 +++++++++++++ 8 files changed, 20 insertions(+) diff --git a/packages/gephi-lite/src/components/common-icons.tsx b/packages/gephi-lite/src/components/common-icons.tsx index b9361b3c..544acf99 100644 --- a/packages/gephi-lite/src/components/common-icons.tsx +++ b/packages/gephi-lite/src/components/common-icons.tsx @@ -155,6 +155,7 @@ export const PlayIconFill = PiPlayFill; export const ResetIcon = PiArrowCounterClockwise; export const RetryIcon = PiArrowClockwise; export const SearchIcon = PiMagnifyingGlass; +export const SelectEdgesIcon = PiLineSegment; export const SelectNeighborsIcon = PiShareNetwork; export const SettingsIcon = PiGear; export const StopIcon = PiStop; diff --git a/packages/gephi-lite/src/locales/dev.json b/packages/gephi-lite/src/locales/dev.json index 85eaa73f..23d57329 100644 --- a/packages/gephi-lite/src/locales/dev.json +++ b/packages/gephi-lite/src/locales/dev.json @@ -856,6 +856,7 @@ "open_in_data": "Show in Data", "open_in_graph": "Show in Graph", "select_all": "Select all", + "select_node_edges": "Select node's edges", "select_node_neighbors": "Select node's neighbors", "unselect_all": "Unselect all", "unselect_all_hidden_edges": "Unselect all hidden edges", diff --git a/packages/gephi-lite/src/locales/en.json b/packages/gephi-lite/src/locales/en.json index b36e66d8..879dd8a2 100644 --- a/packages/gephi-lite/src/locales/en.json +++ b/packages/gephi-lite/src/locales/en.json @@ -726,6 +726,7 @@ "nodes_one": "One selected node", "nodes_zero": "No selected node", "select_all": "Select all", + "select_node_edges": "Select node's edges", "unselect_all": "Unselect all", "unselect_all_hidden_edges": "Unselect all hidden edges", "unselect_all_hidden_nodes": "Unselect all hidden edges", diff --git a/packages/gephi-lite/src/locales/fr.json b/packages/gephi-lite/src/locales/fr.json index cb350e6d..f4db86d3 100644 --- a/packages/gephi-lite/src/locales/fr.json +++ b/packages/gephi-lite/src/locales/fr.json @@ -942,6 +942,7 @@ "open_in_data": "Voir dans Données", "open_in_graph": "Voir dans le Réseau", "select_all": "Sélectionner tout", + "select_node_edges": "Sélectionner les liens du nœud", "select_node_neighbors": "Sélectionner les voisins du nœud", "unselect_all": "Tout désélectionner", "unselect_all_hidden_edges": "Tout désélectionner pour les liens masqués", diff --git a/packages/gephi-lite/src/locales/hu.json b/packages/gephi-lite/src/locales/hu.json index 0bbdb194..d9484bb8 100644 --- a/packages/gephi-lite/src/locales/hu.json +++ b/packages/gephi-lite/src/locales/hu.json @@ -668,6 +668,7 @@ "nodes_one": "Egy kiválasztott csomópont", "nodes_zero": "Nincs kiválasztott csomópont", "select_all": "Mindet kiválaszt", + "select_node_edges": "Csomópont éleinek kiválasztása", "unselect_all": "Minden kijelölés megszüntetése", "unselect_all_hidden_edges": "Törölje az összes rejtett él kijelölését", "unselect_all_hidden_nodes": "Törölje az összes rejtett él kijelölését", diff --git a/packages/gephi-lite/src/locales/ko.json b/packages/gephi-lite/src/locales/ko.json index 307ab564..1407afda 100644 --- a/packages/gephi-lite/src/locales/ko.json +++ b/packages/gephi-lite/src/locales/ko.json @@ -668,6 +668,7 @@ "nodes_one": "1개의 선택된 노드", "nodes_zero": "선택된 노드 없음", "select_all": "전체 선택", + "select_node_edges": "노드의 엣지 선택", "unselect_all": "전체 선택 해제", "unselect_all_hidden_edges": "전체 숨김 엣지 선택 해제", "unselect_all_hidden_nodes": "전체 숨김 엣지 선택 해제", diff --git a/packages/gephi-lite/src/locales/uk.json b/packages/gephi-lite/src/locales/uk.json index 0540e870..ec8fc100 100644 --- a/packages/gephi-lite/src/locales/uk.json +++ b/packages/gephi-lite/src/locales/uk.json @@ -858,6 +858,7 @@ "open_in_data": "Показати в даних", "open_in_graph": "Показати на графіку", "select_all": "Вибрати все", + "select_node_edges": "Вибрати ребра вузла", "select_node_neighbors": "Вибрати сусідів вузла", "unselect_all": "Зняти вибір усіх", "unselect_all_hidden_edges": "Зняти вибір із усіх прихованих країв", diff --git a/packages/gephi-lite/src/views/graphPage/Selection.tsx b/packages/gephi-lite/src/views/graphPage/Selection.tsx index 9b4c13d9..32be7a61 100644 --- a/packages/gephi-lite/src/views/graphPage/Selection.tsx +++ b/packages/gephi-lite/src/views/graphPage/Selection.tsx @@ -14,6 +14,7 @@ import { EditIcon, FieldModelIcon, OpenInGraphIcon, + SelectEdgesIcon, SelectNeighborsIcon, SwapIcon, ThreeDotsVerticalIcon, @@ -205,6 +206,18 @@ function SelectedItem< )} + {type === "nodes" && ( + + )} )} + {type === "nodes" && ( + + )}
{content}
- @@ -177,23 +190,13 @@ function SelectedItem< }, ]} > -
- {type === "edges" && ( - unselect({ type, items: new Set([id]) })} - /> - )} )} {type === "nodes" && ( )} {type === "nodes" && ( @@ -369,6 +372,7 @@ export const Selection: FC = () => { {/* Selection main list */}

{t(`selection.selected_${type}`)}

+
{!!hidden.length && (
From 19338d7c019cb70b9b06e7e35ca8fb08e3a9bc6a Mon Sep 17 00:00:00 2001 From: Claude Date: Wed, 15 Jul 2026 07:23:54 +0000 Subject: [PATCH 025/116] =?UTF-8?q?Volet=20de=20s=C3=A9lection=20:=20n?= =?UTF-8?q?=C5=93uds=20d'edge=20cliquables=20et=20r=C3=A9ordonnancement=20?= =?UTF-8?q?des=20ic=C3=B4nes?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit - Dans le volet Selected Edges, la source et la cible de chaque edge sont désormais cliquables : un clic localise ce nœud (remplace la sélection par ce seul nœud puis recentre la caméra), équivalent au bouton localiser d'un nœud. - Dans le volet Selected Nodes, échange des icônes crayon (éditer) et + (créer un edge), et ajout d'un espace avant l'icône poubelle. --- .../gephi-lite/src/components/data/Edge.tsx | 22 +++++++---- packages/gephi-lite/src/styles/_data.scss | 16 ++++++++ .../src/views/graphPage/Selection.tsx | 37 +++++++++++++------ 3 files changed, 56 insertions(+), 19 deletions(-) diff --git a/packages/gephi-lite/src/components/data/Edge.tsx b/packages/gephi-lite/src/components/data/Edge.tsx index ad108bc9..f0496ad3 100644 --- a/packages/gephi-lite/src/components/data/Edge.tsx +++ b/packages/gephi-lite/src/components/data/Edge.tsx @@ -19,12 +19,22 @@ export const EdgeComponent: FC<{ hidden?: boolean; directed?: boolean; className?: string; -}> = ({ label, color, source, target, hidden, directed, className }) => { + onSourceClick?: () => void; + onTargetClick?: () => void; + nodeButtonTitle?: string; +}> = ({ label, color, source, target, hidden, directed, className, onSourceClick, onTargetClick, nodeButtonTitle }) => { + const renderNode = (node: { label: ReactNode; color: string; hidden?: boolean }, onClick?: () => void) => + onClick ? ( + + ) : ( + + ); + return (
-
- -
+
{renderNode(source, onSourceClick)}
{" "} @@ -36,9 +46,7 @@ export const EdgeComponent: FC<{ )}
-
- -
+
{renderNode(target, onTargetClick)}
); }; diff --git a/packages/gephi-lite/src/styles/_data.scss b/packages/gephi-lite/src/styles/_data.scss index fe04ec7e..8704bb63 100644 --- a/packages/gephi-lite/src/styles/_data.scss +++ b/packages/gephi-lite/src/styles/_data.scss @@ -32,6 +32,22 @@ @extend .text-ellipsis; } + .edge-node-button { + display: block; + width: 100%; + max-width: 100%; + padding: 0; + border: none; + background: none; + text-align: left; + color: inherit; + cursor: pointer; + + &:hover span:last-child { + text-decoration: underline; + } + } + .edge-wrapper { display: flex; justify-content: stretch; diff --git a/packages/gephi-lite/src/views/graphPage/Selection.tsx b/packages/gephi-lite/src/views/graphPage/Selection.tsx index eb547e18..57ca8ffd 100644 --- a/packages/gephi-lite/src/views/graphPage/Selection.tsx +++ b/packages/gephi-lite/src/views/graphPage/Selection.tsx @@ -80,6 +80,16 @@ function SelectedItem< const { deleteItems, updateEdge } = useGraphDatasetActions(); const { select, unselect } = useSelectionActions(); + // Locate a single node: replace the selection with it, then center the camera on it. + // Used when clicking a node inside an edge card (equivalent to a node's "locate" action). + const focusNode = useCallback( + (nodeId: string) => { + select({ type: "nodes", items: new Set([nodeId]), replace: true }); + focusCameraOnNode(nodeId); + }, + [select], + ); + const attributes = useMemo<{ label: ReactNode; value: Scalar; field?: FieldModel }[]>( () => [ ...fields.map((field) => ({ @@ -144,6 +154,9 @@ function SelectedItem< source={{ ...source, label: source.label ?? null, color: source.color ?? DEFAULT_NODE_COLOR }} target={{ ...target, label: target.label ?? null, color: target.color ?? DEFAULT_NODE_COLOR }} className="mb-2" + nodeButtonTitle={t("selection.locate_on_graph")} + onSourceClick={() => focusNode(fullGraph.source(id))} + onTargetClick={() => focusNode(fullGraph.target(id))} /> ); } @@ -237,6 +250,17 @@ function SelectedItem< )} + {type === "nodes" && ( )} - {type === "edges" && ( + )} +
{!!hidden.length && (
From 792ab19c51303ab9f1956236f302eb244f6e1766 Mon Sep 17 00:00:00 2001 From: Claude Date: Wed, 15 Jul 2026 10:27:39 +0000 Subject: [PATCH 027/116] =?UTF-8?q?Corriger=20la=20r=C3=A9initialisation?= =?UTF-8?q?=20du=20weight=20=C3=A0=201=20=C3=A0=20la=20cr=C3=A9ation=20d'u?= =?UTF-8?q?n=20edge?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit À la création, la valeur de weight saisie était écrasée par 1 : allAttributes fusionnait les attributs du formulaire puis "...pick(data, 'label','color','weight')", où data.weight valait toujours 1 (défaut du nouvel edge, jamais modifié car ce n'est pas un champ enregistré du formulaire). Suppression du défaut weight:1 et de l'override pick : la valeur saisie via le tableau d'attributs devient l'unique source de vérité. Un weight non renseigné reste traité comme 1 par les algorithmes (getEdgeWeight par défaut). --- .../src/components/data/EditEdge.tsx | 24 ++++++++----------- 1 file changed, 10 insertions(+), 14 deletions(-) diff --git a/packages/gephi-lite/src/components/data/EditEdge.tsx b/packages/gephi-lite/src/components/data/EditEdge.tsx index 46d970d8..21fe0434 100644 --- a/packages/gephi-lite/src/components/data/EditEdge.tsx +++ b/packages/gephi-lite/src/components/data/EditEdge.tsx @@ -45,7 +45,6 @@ const useEditEdgeForm = ({ const defaultValues = useMemo(() => { if (isNew) return { - weight: 1, isDirected: fullGraph.type !== "undirected", attributes: edgeFields.map((nf) => ({ key: nf.id, @@ -96,19 +95,16 @@ const useEditEdgeForm = ({ return; } - const allAttributes = { - ...fromPairs( - data.attributes - .filter(({ value }) => value !== "" || value === undefined) - .map(({ key, value }) => { - // value are all string because input are all text whatever the data model - // for now we cast value as number if they are number to help downstream algo to create appropriate data model - const valueAsNumber = toNumber(value); - return [key, valueAsNumber ? valueAsNumber : value]; - }), - ), - ...pick(data, "label", "color", "weight"), - }; + const allAttributes = fromPairs( + data.attributes + .filter(({ value }) => value !== "" || value === undefined) + .map(({ key, value }) => { + // value are all string because input are all text whatever the data model + // for now we cast value as number if they are number to help downstream algo to create appropriate data model + const valueAsNumber = toNumber(value); + return [key, valueAsNumber ? valueAsNumber : value]; + }), + ); // Create new edge: if (isNew) { From 87aec6556c88efda03662cf3770cffe2b7e02181 Mon Sep 17 00:00:00 2001 From: Claude Date: Wed, 15 Jul 2026 11:04:10 +0000 Subject: [PATCH 028/116] =?UTF-8?q?Cr=C3=A9ation=20d'edge=20depuis=202=20n?= =?UTF-8?q?=C5=93uds=20s=C3=A9lectionn=C3=A9s=20:=20pr=C3=A9remplir=20targ?= =?UTF-8?q?et=20et=20focus?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Depuis le volet Selected Nodes, un clic sur "+" préremplissait déjà la source. Désormais, si exactement deux nœuds sont sélectionnés, la cible est préremplie avec l'autre nœud et le focus se place sur le premier champ de saisie suivant target (le premier attribut). Avec un seul nœud, comportement inchangé (target vide, focus sur target). --- .../gephi-lite/src/components/data/EditEdge.tsx | 15 +++++++++++---- .../gephi-lite/src/views/graphPage/Selection.tsx | 7 ++++++- 2 files changed, 17 insertions(+), 5 deletions(-) diff --git a/packages/gephi-lite/src/components/data/EditEdge.tsx b/packages/gephi-lite/src/components/data/EditEdge.tsx index 74420808..a0949b8e 100644 --- a/packages/gephi-lite/src/components/data/EditEdge.tsx +++ b/packages/gephi-lite/src/components/data/EditEdge.tsx @@ -27,11 +27,13 @@ interface UpdatedEdgeState { const useEditEdgeForm = ({ edgeId, source: initialSource, + target: initialTarget, onSubmitted, onCancel, }: { edgeId?: string; source?: string; + target?: string; onSubmitted: () => void; onCancel: () => void; }) => { @@ -49,6 +51,7 @@ const useEditEdgeForm = ({ return { weight: 1, source: initialSource, + target: initialTarget, isDirected: fullGraph.type !== "undirected", attributes: edgeFields.map((nf) => ({ key: nf.id, @@ -70,7 +73,7 @@ const useEditEdgeForm = ({ ...pick(nf, ["type", "format", "separator"]), })), }; - }, [edgeData, edgeId, fullGraph, isNew, edgeFields, initialSource]); + }, [edgeData, edgeId, fullGraph, isNew, edgeFields, initialSource, initialTarget]); const { register, handleSubmit, @@ -224,7 +227,7 @@ const useEditEdgeForm = ({ }} value={typeof value === "string" ? { type: "nodes", id: value } : null} type="nodes" - autoFocus={isNew && !!initialSource} + autoFocus={isNew && !!initialSource && !initialTarget} /> )} /> @@ -278,6 +281,9 @@ const useEditEdgeForm = ({ field={edgeFieldsIndex[field.key]} scalar={props.field.value} onChange={(v) => props.field.onChange(v)} + // When creating an edge with both extremities pre-filled (e.g. from two + // selected nodes), focus the first attribute field, right after target. + autoFocus={isNew && !!initialSource && !!initialTarget && i === 0} /> )} /> @@ -336,10 +342,10 @@ const useEditEdgeForm = ({ }; }; -export const EditEdgeModal: FC> = ({ +export const EditEdgeModal: FC> = ({ cancel, submit, - arguments: { edgeId, source }, + arguments: { edgeId, source, target }, }) => { const { t } = useTranslation(); const isNew = typeof edgeId === "undefined"; @@ -350,6 +356,7 @@ export const EditEdgeModal: FC> } = useEditEdgeForm({ edgeId, source, + target, onSubmitted: () => submit({}), onCancel: () => cancel(), }); diff --git a/packages/gephi-lite/src/views/graphPage/Selection.tsx b/packages/gephi-lite/src/views/graphPage/Selection.tsx index 3d66bda7..9966d221 100644 --- a/packages/gephi-lite/src/views/graphPage/Selection.tsx +++ b/packages/gephi-lite/src/views/graphPage/Selection.tsx @@ -79,6 +79,7 @@ function SelectedItem< const filteredGraph = useFilteredGraph(); const { deleteItems, updateEdge } = useGraphDatasetActions(); const { select, unselect } = useSelectionActions(); + const { items: selectionItems } = useSelection(); // Locate a single node: replace the selection with it, then center the camera on it. // Used when clicking a node inside an edge card (equivalent to a node's "locate" action). @@ -267,7 +268,11 @@ function SelectedItem< title={t(`selection.create_edge_from_node`)} disabled={item.hidden} onClick={() => { - openModal({ component: EditEdgeModal, arguments: { source: id } }); + // When exactly two nodes are selected, pre-fill the edge target with the other + // one (source being this node), so only the attributes remain to fill in. + const others = Array.from(selectionItems).filter((n) => n !== id); + const target = selectionItems.size === 2 && others.length === 1 ? others[0] : undefined; + openModal({ component: EditEdgeModal, arguments: { source: id, target } }); }} > From 0c1d6ccfc4083b676847bdcb40a233995e377272 Mon Sep 17 00:00:00 2001 From: Claude Date: Wed, 15 Jul 2026 12:17:09 +0000 Subject: [PATCH 029/116] =?UTF-8?q?Valeur=20par=20d=C3=A9faut=20d'attribut?= =?UTF-8?q?=20pour=20initialiser=20la=20cr=C3=A9ation=20de=20node/edge?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Ajout d'un champ defaultValue au FieldModel (SDK), éditable via le formulaire créer/modifier un attribut (EditFieldModel) avec l'éditeur typé EditItemAttribute. Les formulaires de création de node et edge initialisent chaque champ avec la valeur par défaut de l'attribut. Uniquement à la création, pas de rétro-remplissage des items existants. --- .../src/components/data/EditEdge.tsx | 2 +- .../src/components/data/EditFieldModel.tsx | 22 +++++++++++++++++++ .../src/components/data/EditNode.tsx | 2 +- packages/gephi-lite/src/locales/dev.json | 1 + packages/gephi-lite/src/locales/fr.json | 1 + packages/gephi-lite/src/locales/uk.json | 1 + packages/sdk/src/graph/types.ts | 2 ++ 7 files changed, 29 insertions(+), 2 deletions(-) diff --git a/packages/gephi-lite/src/components/data/EditEdge.tsx b/packages/gephi-lite/src/components/data/EditEdge.tsx index 5843220b..8ed3755d 100644 --- a/packages/gephi-lite/src/components/data/EditEdge.tsx +++ b/packages/gephi-lite/src/components/data/EditEdge.tsx @@ -54,7 +54,7 @@ const useEditEdgeForm = ({ isDirected: fullGraph.type !== "undirected", attributes: edgeFields.map((nf) => ({ key: nf.id, - value: undefined, + value: nf.defaultValue, ...pick(nf, ["type", "format", "separator"]), })), }; diff --git a/packages/gephi-lite/src/components/data/EditFieldModel.tsx b/packages/gephi-lite/src/components/data/EditFieldModel.tsx index 6f7a3950..43405a18 100644 --- a/packages/gephi-lite/src/components/data/EditFieldModel.tsx +++ b/packages/gephi-lite/src/components/data/EditFieldModel.tsx @@ -12,6 +12,7 @@ import { DATE_FORMATS } from "../../utils/date"; import { CancelIcon } from "../common-icons"; import { BaseOption, Select } from "../forms/Select"; import { Modal } from "../modals"; +import { EditItemAttribute } from "./Attribute"; export type EditFieldModelFormProps = { onSubmitted: () => void; @@ -96,6 +97,12 @@ export const useEditFieldModelForm = ({ const idCollisionLabel = errors.id ? fields.find((f) => f.id === fieldModel.id)?.label : undefined; + // The default value editor needs the type's required options (date format, keywords + // separator) to render and serialize correctly, so only show it once they are set. + const canEditDefaultValue = + (fieldModel.type !== "date" || ("format" in fieldModel && !!fieldModel.format)) && + (fieldModel.type !== "keywords" || ("separator" in fieldModel && !!fieldModel.separator)); + return { submit, main: ( @@ -221,6 +228,21 @@ export const useEditFieldModelForm = ({ )}
)} + + {/* Default value, used to initialize the field when creating a new node/edge */} + {canEditDefaultValue && ( +
+ + setValue("defaultValue", value)} + /> +
+ )}
), footer: ( diff --git a/packages/gephi-lite/src/components/data/EditNode.tsx b/packages/gephi-lite/src/components/data/EditNode.tsx index 3b29fc89..f9b60704 100644 --- a/packages/gephi-lite/src/components/data/EditNode.tsx +++ b/packages/gephi-lite/src/components/data/EditNode.tsx @@ -43,7 +43,7 @@ const useEditNodeForm = ({ y: 0, attributes: nodeFields.map((nf) => ({ key: nf.id, - value: undefined, + value: nf.defaultValue, ...pick(nf, ["type", "format", "separator"]), })), }; diff --git a/packages/gephi-lite/src/locales/dev.json b/packages/gephi-lite/src/locales/dev.json index 4b9f900c..8645ed2d 100644 --- a/packages/gephi-lite/src/locales/dev.json +++ b/packages/gephi-lite/src/locales/dev.json @@ -397,6 +397,7 @@ "edges_zero": "edge", "field": { "date-format": "Date format", + "default_value": "Default value", "id": "Identifier", "label": "Label", "separator": "Keywords separator", diff --git a/packages/gephi-lite/src/locales/fr.json b/packages/gephi-lite/src/locales/fr.json index b0a3e4b8..bd9a52e3 100644 --- a/packages/gephi-lite/src/locales/fr.json +++ b/packages/gephi-lite/src/locales/fr.json @@ -443,6 +443,7 @@ "edges_zero": "lien", "field": { "date-format": "Format de date", + "default_value": "Valeur par défaut", "id": "Identifiant", "label": "Label", "separator": "Séparateur de mots-clefs", diff --git a/packages/gephi-lite/src/locales/uk.json b/packages/gephi-lite/src/locales/uk.json index ee680ff5..222092d3 100644 --- a/packages/gephi-lite/src/locales/uk.json +++ b/packages/gephi-lite/src/locales/uk.json @@ -395,6 +395,7 @@ "edges_zero": "край", "field": { "date-format": "Формат дати", + "default_value": "Значення за замовчуванням", "dates_formats_link_message": "Дізнайтеся більше про парсинг токенів Luxon", "dates_formats_message": "Дати аналізуються за допомогою бібліотеки JavaScript з відкритим кодом Luxon.", "id": "Ідентифікатор", diff --git a/packages/sdk/src/graph/types.ts b/packages/sdk/src/graph/types.ts index 8d8b9f2a..e2b15b18 100644 --- a/packages/sdk/src/graph/types.ts +++ b/packages/sdk/src/graph/types.ts @@ -114,6 +114,8 @@ export type FieldModel< itemType: T; label?: string; dynamic?: Dynamic; + // Value used to initialize this attribute's field when creating a new node/edge: + defaultValue?: Scalar; } & FieldModelTypeSpecCollection[K]; export type FieldModelWithStats = FieldModel & { From db735b5673bad9edf32b66c3f8be2b8c5d2d4984 Mon Sep 17 00:00:00 2001 From: warrott Date: Wed, 15 Jul 2026 17:58:28 +0200 Subject: [PATCH 030/116] ajout du nombre d'elements selectionnes dans le titre du panneau de droite --- packages/gephi-lite/src/views/graphPage/Selection.tsx | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/packages/gephi-lite/src/views/graphPage/Selection.tsx b/packages/gephi-lite/src/views/graphPage/Selection.tsx index 9966d221..31e4ee14 100644 --- a/packages/gephi-lite/src/views/graphPage/Selection.tsx +++ b/packages/gephi-lite/src/views/graphPage/Selection.tsx @@ -390,7 +390,9 @@ export const Selection: FC = () => { {/* Selection main list */}
-

{t(`selection.selected_${type}`)}

+

+ {t(`selection.selected_${type}`)} ({items.size}) +

{type === "edges" && visible.length > 0 && ( - + { + label: t("datatable.move_left"), + disabled: !i, + onClick: () => moveFieldModel(type, field.id, -1), + }, + { + label: t("datatable.move_right"), + disabled: i === a.length - 1 || !!a[i + 1]?.readOnly, + onClick: () => moveFieldModel(type, field.id, +1), + }, + { + label: t("datatable.insert_left"), + onClick: () => + openModal({ + component: EditFieldModelModal, + arguments: { insertAt: { pos: "before", id: field.id }, type }, + }), + }, + { + label: t("datatable.insert_right"), + onClick: () => + openModal({ + component: EditFieldModelModal, + arguments: { insertAt: { pos: "after", id: field.id }, type }, + }), + }, + { + type: "divider", + }, + { + label: t("datatable.sort_asc"), + onClick: () => { + setSort([ + { + id: header.id, + desc: false, + }, + ]); + }, + }, + { + label: t("datatable.sort_desc"), + onClick: () => { + setSort([ + { + id: header.id, + desc: true, + }, + ]); + }, + }, + { + type: "divider", + }, + { + label: t("edition.delete_attribute"), + onClick: () => + openModal({ + component: ConfirmModal, + arguments: { + title: t(`edition.delete_${type}_attributes`, { name: field.id }), + message: t("edition.confirm_delete_attributes", { + nbValues: size(type === "nodes" ? nodeData : edgeData), + name: field.id, + }), + successMsg: t(`edition.delete_attributes_success`, { name: field.id }), + }, + afterSubmit: () => { + deleteFieldModel(field); + }, + }), + }, + ]} + > + + + )} ), cell: (props) => ( @@ -313,6 +315,7 @@ export const useDataTableColumns = (itemIDs: string[]) => { id={props.row.getValue("id")} field={field} value={props.row.getValue(`field::${field.id}`)} + readOnly={field.readOnly} /> ), })), diff --git a/packages/sdk/src/graph/types.ts b/packages/sdk/src/graph/types.ts index 8d8b9f2a..3884a077 100644 --- a/packages/sdk/src/graph/types.ts +++ b/packages/sdk/src/graph/types.ts @@ -114,6 +114,8 @@ export type FieldModel< itemType: T; label?: string; dynamic?: Dynamic; + // When true, this field is managed automatically by the app and cannot be edited, moved or deleted by the user: + readOnly?: boolean; } & FieldModelTypeSpecCollection[K]; export type FieldModelWithStats = FieldModel & { From b497f0ce22cae8d231d2f16c519b181bc07475b8 Mon Sep 17 00:00:00 2001 From: Claude Date: Wed, 15 Jul 2026 17:34:22 +0000 Subject: [PATCH 032/116] =?UTF-8?q?Backfill=20Update/Creation=20Date=20sur?= =?UTF-8?q?=20les=20graphes=20d=C3=A9j=C3=A0=20charg=C3=A9s=20en=20session?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Les colonnes de dates n'étaient ajoutées qu'à la création/modification d'un node/edge ou à l'import d'un fichier. Un graphe déjà présent dans le stockage local du navigateur (rechargement de session) contournait ce mécanisme et n'affichait jamais ces colonnes. Au chargement d'un dataset depuis la session, les champs manquants sont désormais complétés avec la date du jour. --- packages/gephi-lite/src/core/Initialize.tsx | 3 ++- packages/gephi-lite/src/core/graph/dates.ts | 18 +++++++++++++++++- 2 files changed, 19 insertions(+), 2 deletions(-) diff --git a/packages/gephi-lite/src/core/Initialize.tsx b/packages/gephi-lite/src/core/Initialize.tsx index d6e16b56..8afc0b34 100644 --- a/packages/gephi-lite/src/core/Initialize.tsx +++ b/packages/gephi-lite/src/core/Initialize.tsx @@ -13,6 +13,7 @@ import { useFileActions, useGraphDataset, useGraphDatasetActions } from "./conte import { filtersAtom } from "./filters"; import { parseFiltersState } from "./filters/utils"; import { graphDatasetAtom } from "./graph"; +import { ensureSystemDatesInDataset } from "./graph/dates"; import { parseDataset } from "./graph/utils"; import { useModal } from "./modals"; import { useNotifications } from "./notifications"; @@ -142,7 +143,7 @@ export const Initialize: FC> = ({ children }) => { const appearance = rawAppearance ? parseAppearanceState(rawAppearance) : null; const filters = rawFilters ? parseFiltersState(rawFilters) : null; - graphDatasetAtom.set(dataset); + graphDatasetAtom.set(ensureSystemDatesInDataset(dataset)); filtersAtom.set((prev) => filters || prev); appearanceAtom.set((prev) => appearance || prev); resetCamera({ forceRefresh: true }); diff --git a/packages/gephi-lite/src/core/graph/dates.ts b/packages/gephi-lite/src/core/graph/dates.ts index 73a2cb43..91eb7c69 100644 --- a/packages/gephi-lite/src/core/graph/dates.ts +++ b/packages/gephi-lite/src/core/graph/dates.ts @@ -1,5 +1,6 @@ -import { FieldModel, ItemData, ItemType } from "@gephi/gephi-lite-sdk"; +import { FieldModel, GraphDataset, ItemData, ItemType } from "@gephi/gephi-lite-sdk"; import { DateTime } from "luxon"; +import { mapValues } from "lodash"; /** * Automatic "creation date" / "update date" fields, set on every node and @@ -59,3 +60,18 @@ export function stampUpdateDate(previousData: ItemData | undefined, data: ItemDa [UPDATE_DATE_FIELD_ID]: nowAsSystemDateScalar(), }; } + +// Backfills the system date fields (and field models) on a dataset that predates this feature, eg. one +// restored from local storage or an older saved project. Items that already have both dates are left untouched: +export function ensureSystemDatesInDataset(dataset: GraphDataset): GraphDataset { + const stampIfMissing = (data: ItemData) => + data[CREATION_DATE_FIELD_ID] && data[UPDATE_DATE_FIELD_ID] ? data : stampCreationDates(data); + + return { + ...dataset, + nodeFields: ensureSystemDateFields("nodes", dataset.nodeFields), + edgeFields: ensureSystemDateFields("edges", dataset.edgeFields), + nodeData: mapValues(dataset.nodeData, stampIfMissing), + edgeData: mapValues(dataset.edgeData, stampIfMissing), + }; +} From d1fad54b4eb780561d4e1d9dcadba24021638258 Mon Sep 17 00:00:00 2001 From: Claude Date: Thu, 16 Jul 2026 03:06:10 +0000 Subject: [PATCH 033/116] =?UTF-8?q?Colonnes=20formule=20:=20script=20persi?= =?UTF-8?q?st=C3=A9=20et=20recalcul=C3=A9=20=C3=A0=20la=20vol=C3=A9e?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Les attributs scriptés deviennent des colonnes "formule" dont le script est stocké dans le FieldModel (donc persisté avec le dataset) et dont les valeurs sont recalculées à la volée par le pipeline des attributs dynamiques. - SDK : ajout de FieldModel.script (FieldScriptFunction), sérialisé automatiquement grâce au support des fonctions dans gephiLiteStringify. - dynamicItemDataAtom évalue aussi les champs script du modèle : recalcul au chargement, à l'édition d'un nœud/arête, au changement de topologie ou de script. Une erreur de script laisse la cellule vide sans tout interrompre. - Le menu "scripted attribute" stocke désormais le script au lieu de figer les valeurs, avec un mode édition pour re-modifier le script. - Table de données : colonnes formule en lecture seule, le menu de colonne "modifier" rouvre l'éditeur de script. - Les champs script sont exclus des formulaires de création/édition de nœud/arête et d'édition multiple (ils sont calculés). --- .../data/CreateScriptedFieldModel.tsx | 108 ++++++++++-------- .../src/components/data/EditEdge.tsx | 4 +- .../src/components/data/EditMultipleItems.tsx | 21 ++-- .../src/components/data/EditNode.tsx | 4 +- .../src/core/graph/dynamicAttributes.ts | 44 ++++++- packages/gephi-lite/src/core/graph/index.ts | 40 +++++-- packages/gephi-lite/src/locales/dev.json | 5 + packages/gephi-lite/src/locales/fr.json | 5 + .../dataTable/useDataTableColumns.tsx | 17 ++- packages/sdk/src/graph/types.ts | 9 ++ 10 files changed, 183 insertions(+), 74 deletions(-) diff --git a/packages/gephi-lite/src/components/data/CreateScriptedFieldModel.tsx b/packages/gephi-lite/src/components/data/CreateScriptedFieldModel.tsx index b2eb1f9b..53282a54 100644 --- a/packages/gephi-lite/src/components/data/CreateScriptedFieldModel.tsx +++ b/packages/gephi-lite/src/components/data/CreateScriptedFieldModel.tsx @@ -3,7 +3,7 @@ import cx from "classnames"; import { FC, useCallback, useMemo, useState } from "react"; import { useTranslation } from "react-i18next"; -import { useFilteredGraph, useGraphDataset, useGraphDatasetActions } from "../../core/context/dataContexts"; +import { useGraphDataset, useGraphDatasetActions } from "../../core/context/dataContexts"; import { graphDatasetAtom } from "../../core/graph"; import { inferFieldType } from "../../core/graph/fieldModel"; import { dataGraphToFullGraph } from "../../core/graph/utils"; @@ -20,6 +20,8 @@ export type CreateScriptedFieldModelFormProps = { onCancel: () => void; type: ItemType; insertAt?: { id: string; pos: "before" | "after" }; + // When set, the form edits the script of an existing formula field instead of creating a new one: + fieldModelId?: string; }; type ScriptedFieldModelFunction = (id: string, attributes: ItemData, index: number, graph: FullGraph) => Scalar; @@ -78,13 +80,19 @@ export const useCreateScriptedFieldModelForm = ({ onSubmitted, type, insertAt, + fieldModelId, }: CreateScriptedFieldModelFormProps) => { const { t } = useTranslation(); const { notify } = useNotifications(); const dataset = useGraphDataset(); - const filteredGraph = useFilteredGraph(); - const { createFieldModel } = useGraphDatasetActions(); + const { createFieldModel, setFieldModel } = useGraphDatasetActions(); const { nodeFields, edgeFields } = dataset; + const fields = type === "nodes" ? nodeFields : edgeFields; + + // Edit mode: we are changing the script of an existing formula field. + const editedField = useMemo(() => fields.find((f) => f.id === fieldModelId), [fields, fieldModelId]); + const isEditing = !!editedField; + const checkFunction = useCallback( (fn: ScriptedFieldModelFunction) => { if (!fn) throw new Error("Function is not defined"); @@ -98,79 +106,78 @@ export const useCreateScriptedFieldModelForm = ({ [type], ); - const [newId, setNewId] = useState(""); - // TODO: Add input for scope - const [scope, _setScope] = useState<"all" | "filtered" /* | "selected"*/>("all"); + const [newId, setNewId] = useState(editedField?.id ?? ""); - const fields = type === "nodes" ? nodeFields : edgeFields; - const existingField = useMemo(() => fields.find((f) => f.id === newId), [fields, newId]); + const existingField = useMemo( + () => (isEditing ? undefined : fields.find((f) => f.id === newId)), + [fields, isEditing, newId], + ); const isFormValid = useMemo(() => !!newId && !existingField, [existingField, newId]); const onSubmit = useCallback( (script: ScriptedFieldModelFunction) => { try { - let graph: FullGraph; - switch (scope) { - // TODO: - // case "selected": - // graph = dataGraphToFullGraph(dataset, dataset); - // break; - case "filtered": - graph = dataGraphToFullGraph(dataset, filteredGraph); - break; - case "all": - default: - graph = dataGraphToFullGraph(dataset); - // graph = dataGraphToFullGraph(graphDatasetAtom.get()); - break; - } - + // The values are NOT stored: the script is persisted in the field model and recomputed on + // the fly. We still run it once over the whole graph to validate it and infer the field type. + const graph: FullGraph = dataGraphToFullGraph(dataset); Object.freeze(graph); - const values: Record = {}; - if (type === "nodes") { - graph.nodes().forEach((id, index) => { - values[id] = script(id, graph.getNodeAttributes(id), index, graph); - }); - } else { - graph.edges().forEach((id, index) => { - values[id] = script(id, graph.getEdgeAttributes(id), index, graph); - }); - } - - const valuesArray = Object.values(values); + const ids = type === "nodes" ? graph.nodes() : graph.edges(); + const sampleValues: Scalar[] = ids.map((id, index) => + script(id, type === "nodes" ? graph.getNodeAttributes(id) : graph.getEdgeAttributes(id), index, graph), + ); const fieldModel: FieldModel = { id: newId, itemType: type, - ...inferFieldType(newId, valuesArray, valuesArray.length), + label: editedField?.label, + script, + ...inferFieldType(newId, sampleValues, sampleValues.length), }; - const index = insertAt - ? fields.findIndex((f) => f.id === insertAt.id) + (insertAt.pos === "before" ? -1 : 1) - : undefined; - createFieldModel(fieldModel, { index, values }); + + if (isEditing) { + setFieldModel(fieldModel); + } else { + const index = insertAt + ? fields.findIndex((f) => f.id === insertAt.id) + (insertAt.pos === "before" ? -1 : 1) + : undefined; + createFieldModel(fieldModel, { index }); + } notify({ type: "success", - title: t(`edition.create_${type}_scripted_field`), - message: t(`edition.create_${type}_scripted_field_success`), + title: t(`edition.${isEditing ? "update" : "create"}_${type}_scripted_field`), + message: t(`edition.${isEditing ? "update" : "create"}_${type}_scripted_field_success`), }); } catch (e) { notify({ type: "error", - title: t(`edition.create_${type}_scripted_field`), + title: t(`edition.${isEditing ? "update" : "create"}_${type}_scripted_field`), message: (e as Error).message || t("error.unknown"), }); } if (onSubmitted) onSubmitted(); }, - [createFieldModel, dataset, fields, filteredGraph, insertAt, newId, notify, onSubmitted, scope, t, type], + [ + createFieldModel, + dataset, + editedField, + fields, + insertAt, + isEditing, + newId, + notify, + onSubmitted, + setFieldModel, + t, + type, + ], ); const { content: editorContent, getFunction } = useFunctionEditor({ checkFunction, functionJsDoc: BASE_JS[type].doc, - initialFunctionCode: BASE_JS[type].baseFn, + initialFunctionCode: editedField?.script?.toString() ?? BASE_JS[type].baseFn, onSubmit: isFormValid ? onSubmit : undefined, - saveAndRunI18nKey: "datatable.save_and_create_column", + saveAndRunI18nKey: isEditing ? "datatable.save_and_update_column" : "datatable.save_and_create_column", }); const submit = useCallback(() => { const fn = getFunction(); @@ -181,7 +188,7 @@ export const useCreateScriptedFieldModelForm = ({ submit, main: (
-

{t(`edition.create_${type}_scripted_field`)}

+

{t(`edition.${isEditing ? "update" : "create"}_${type}_scripted_field`)}

@@ -241,7 +249,7 @@ export const CreateScriptedFieldModelModal: FC< return ( cancel()} className="modal-lg edit-attribute" onSubmit={submitForm} diff --git a/packages/gephi-lite/src/components/data/EditEdge.tsx b/packages/gephi-lite/src/components/data/EditEdge.tsx index 8ed3755d..4dc42036 100644 --- a/packages/gephi-lite/src/components/data/EditEdge.tsx +++ b/packages/gephi-lite/src/components/data/EditEdge.tsx @@ -42,7 +42,9 @@ const useEditEdgeForm = ({ const { emitter } = useEventsContext(); const { select } = useSelectionActions(); const { createEdge, updateEdge } = useGraphDatasetActions(); - const { edgeData, layout, fullGraph, edgeFields } = useGraphDataset(); + const { edgeData, layout, fullGraph, edgeFields: allEdgeFields } = useGraphDataset(); + // Formula (scripted) fields are computed, so they are not editable through this form: + const edgeFields = useMemo(() => allEdgeFields.filter((ef) => !ef.script), [allEdgeFields]); const edgeFieldsIndex = useMemo(() => keyBy(edgeFields, "id"), [edgeFields]); const isNew = typeof edgeId === "undefined"; diff --git a/packages/gephi-lite/src/components/data/EditMultipleItems.tsx b/packages/gephi-lite/src/components/data/EditMultipleItems.tsx index 0a5297e3..b36859bb 100644 --- a/packages/gephi-lite/src/components/data/EditMultipleItems.tsx +++ b/packages/gephi-lite/src/components/data/EditMultipleItems.tsx @@ -31,15 +31,18 @@ export const useEditMultipleItemsForm = ({ onSubmitted, onCancel, type, items }: const fieldOptions = useMemo( () => - (type === "nodes" ? nodeFields : edgeFields).map((field) => ({ - field, - value: field.id, - label: ( - <> - {field.label || field.id} - - ), - })), + (type === "nodes" ? nodeFields : edgeFields) + // Formula (scripted) fields are computed, so they cannot be bulk-edited: + .filter((field) => !field.script) + .map((field) => ({ + field, + value: field.id, + label: ( + <> + {field.label || field.id} + + ), + })), [edgeFields, nodeFields, type], ); diff --git a/packages/gephi-lite/src/components/data/EditNode.tsx b/packages/gephi-lite/src/components/data/EditNode.tsx index f9b60704..217f26c7 100644 --- a/packages/gephi-lite/src/components/data/EditNode.tsx +++ b/packages/gephi-lite/src/components/data/EditNode.tsx @@ -32,7 +32,9 @@ const useEditNodeForm = ({ const { emitter } = useEventsContext(); const { select } = useSelectionActions(); const { createNode, updateNode } = useGraphDatasetActions(); - const { nodeData, layout, nodeFields } = useGraphDataset(); + const { nodeData, layout, nodeFields: allNodeFields } = useGraphDataset(); + // Formula (scripted) fields are computed, so they are not editable through this form: + const nodeFields = useMemo(() => allNodeFields.filter((nf) => !nf.script), [allNodeFields]); const nodeFieldsIndex = useMemo(() => keyBy(nodeFields, "id"), [nodeFields]); const isNew = typeof nodeId === "undefined"; diff --git a/packages/gephi-lite/src/core/graph/dynamicAttributes.ts b/packages/gephi-lite/src/core/graph/dynamicAttributes.ts index 0ba783e0..c6bd003c 100644 --- a/packages/gephi-lite/src/core/graph/dynamicAttributes.ts +++ b/packages/gephi-lite/src/core/graph/dynamicAttributes.ts @@ -2,6 +2,7 @@ import { DynamicItemDataSpec, DynamicItemsDataSpec, FieldModel, + FullGraph, ItemData, ItemType, Scalar, @@ -59,6 +60,38 @@ export const computeAllDynamicAttributes = (itemType: T, gra ]), ); +/** + * Computes the value of every "formula" (scripted) field, for every item of the given full graph. + * Returns a map { [itemId]: { [fieldId]: value } }, so it can be merged with the topology-based + * dynamic attributes. A failing script never breaks the whole computation: the faulty cell is left + * undefined. + */ +export const computeScriptFieldsData = ( + itemType: T, + fields: FieldModel[], + fullGraph: FullGraph, +): Record => { + const scriptFields = fields.filter((field) => !!field.script); + const ids = itemType === "nodes" ? fullGraph.nodes() : fullGraph.edges(); + const getAttributes = (id: string) => + itemType === "nodes" ? fullGraph.getNodeAttributes(id) : fullGraph.getEdgeAttributes(id); + + return fromPairs( + ids.map((id, index) => { + const attributes = getAttributes(id); + const values: ItemData = {}; + scriptFields.forEach((field) => { + try { + values[field.id] = field.script!(id, attributes, index, fullGraph); + } catch (_e) { + values[field.id] = undefined; + } + }); + return [id, values]; + }), + ); +}; + export const mergeStaticDynamicData = ( staticData: Record, dynamicData: Record, @@ -69,8 +102,13 @@ export const mergeStaticDynamicData = ( })); }; +// A formula (scripted) field is computed on the fly and stored in the "dynamic" data channel, just +// like the topology-based dynamic attributes (degree, ...): +export const isComputedField = (field: Pick, "dynamic" | "script">) => + !!field.dynamic || !!field.script; + export const staticDynamicAttributeKey = (field: FieldModel) => - `${field.dynamic ? "dynamic" : "static"}.${field.id}`; + `${isComputedField(field) ? "dynamic" : "static"}.${field.id}`; export const staticDynamicAttributeLabel = (field: FieldModel) => { if (field.dynamic) { @@ -81,7 +119,7 @@ export const staticDynamicAttributeLabel = (field: FieldModel export function getScalarFromStaticDynamicData( data: StaticDynamicItemData, - field: Pick, "id" | "dynamic">, + field: Pick, "id" | "dynamic" | "script">, ): Scalar { - return field.dynamic ? data.dynamic[field.id] : data.static[field.id]; + return isComputedField(field) ? data.dynamic[field.id] : data.static[field.id]; } diff --git a/packages/gephi-lite/src/core/graph/index.ts b/packages/gephi-lite/src/core/graph/index.ts index 0a8af19b..7bfe062a 100644 --- a/packages/gephi-lite/src/core/graph/index.ts +++ b/packages/gephi-lite/src/core/graph/index.ts @@ -38,11 +38,12 @@ import { selectionAtom } from "../selection"; import { SelectionState } from "../selection/types"; import { getEmptySelectionState } from "../selection/utils"; import { ItemType } from "../types"; -import { DYNAMIC_ATTRIBUTES, computeAllDynamicAttributes } from "./dynamicAttributes"; +import { DYNAMIC_ATTRIBUTES, computeAllDynamicAttributes, computeScriptFieldsData } from "./dynamicAttributes"; import { FieldModel, GraphDataset, SigmaGraph } from "./types"; import { cleanEdge, cleanNode, + dataGraphToFullGraph, dataGraphToSigmaGraph, datasetToString, getEmptyGraphDataset, @@ -452,12 +453,37 @@ export const useFilteredGraphAt = (index: number) => { }; export const dynamicItemDataAtom = derivedAtom( [filteredGraphAtom, graphDatasetAtom], - (filteredGraphCache) => ({ - dynamicNodeData: computeAllDynamicAttributes("nodes", filteredGraphCache), - dynamicNodeFields: map(DYNAMIC_ATTRIBUTES.nodes, ({ field }) => field) || [], - dynamicEdgeData: computeAllDynamicAttributes("edges", filteredGraphCache), - dynamicEdgeFields: map(DYNAMIC_ATTRIBUTES.edges, ({ field }) => field) || [], - }), + (filteredGraphCache, graphDataset) => { + // Full graph (topology + attributes) used to evaluate the formula (scripted) fields: + const hasScriptFields = + graphDataset.nodeFields.some((f) => f.script) || graphDataset.edgeFields.some((f) => f.script); + const fullGraph = hasScriptFields ? dataGraphToFullGraph(graphDataset, filteredGraphCache) : undefined; + + const mergeScripts = ( + itemType: T, + dynamicData: Record, + fields: FieldModel[], + ): Record => { + if (!fullGraph || !fields.some((f) => f.script)) return dynamicData; + const scriptData = computeScriptFieldsData(itemType, fields, fullGraph); + return mapValues(dynamicData, (data, id) => ({ ...data, ...scriptData[id] })); + }; + + return { + dynamicNodeData: mergeScripts( + "nodes", + computeAllDynamicAttributes("nodes", filteredGraphCache), + graphDataset.nodeFields, + ), + dynamicNodeFields: map(DYNAMIC_ATTRIBUTES.nodes, ({ field }) => field) || [], + dynamicEdgeData: mergeScripts( + "edges", + computeAllDynamicAttributes("edges", filteredGraphCache), + graphDataset.edgeFields, + ), + dynamicEdgeFields: map(DYNAMIC_ATTRIBUTES.edges, ({ field }) => field) || [], + }; + }, { checkInput: false }, ); export const visualGettersAtom = derivedAtom( diff --git a/packages/gephi-lite/src/locales/dev.json b/packages/gephi-lite/src/locales/dev.json index 8645ed2d..e261772e 100644 --- a/packages/gephi-lite/src/locales/dev.json +++ b/packages/gephi-lite/src/locales/dev.json @@ -181,6 +181,7 @@ "targetLabel": "Target label" }, "save_and_create_column": "Save and create column", + "save_and_update_column": "Save and update column", "save_cell": "Save cell", "sort_asc": "Sort A→Z (0→9)", "sort_desc": "Sort Z→A (9→0)" @@ -246,6 +247,8 @@ "update_edges": "Edit existing edge", "update_edges_field": "Edit edges attribute", "update_edges_field_success": "The edge attribute has successfully been updated.", + "update_edges_scripted_field": "Edit edges scripted attribute", + "update_edges_scripted_field_success": "The scripted edge attribute has successfully been updated.", "update_edges_success": "The edge has successfully been updated.", "update_multiple_edges": "Edit existing edges", "update_multiple_edges_success": "The {{count, number}} edges have successfully been updated.", @@ -254,6 +257,8 @@ "update_nodes": "Edit existing node", "update_nodes_field": "Edit nodes attribute", "update_nodes_field_success": "The node attribute has successfully been updated.", + "update_nodes_scripted_field": "Edit nodes scripted attribute", + "update_nodes_scripted_field_success": "The scripted node attribute has successfully been updated.", "update_nodes_success": "The node has successfully been updated.", "update_this_edges": "Edit this edge", "update_this_nodes": "Edit this node" diff --git a/packages/gephi-lite/src/locales/fr.json b/packages/gephi-lite/src/locales/fr.json index bd9a52e3..b407c091 100644 --- a/packages/gephi-lite/src/locales/fr.json +++ b/packages/gephi-lite/src/locales/fr.json @@ -201,6 +201,7 @@ "targetId": "Cible ID" }, "save_and_create_column": "Enregistrer et créer la colonne", + "save_and_update_column": "Enregistrer et mettre à jour la colonne", "save_cell": "Enregistrer la cellule", "sort_asc": "Tri A→Z (0→9)", "sort_desc": "Tri Z→A (9→0)" @@ -264,6 +265,8 @@ "update_edges": "Éditer le lien existant", "update_edges_field": "Éditer l'attribut de liens", "update_edges_field_success": "L'attribut de lien a bien été mis à jour.", + "update_edges_scripted_field": "Éditer l'attribut de lien scripté", + "update_edges_scripted_field_success": "L'attribut de lien scripté a été mis à jour.", "update_edges_success": "Le lien a été mis à jour avec succès.", "update_multiple_edges": "Éditer les liens existants", "update_multiple_edges_success": "Les {{count,number}} liens ont bien été mis à jour.", @@ -272,6 +275,8 @@ "update_nodes": "Éditer le nœud existant", "update_nodes_field": "Éditer l'attribut des nœuds", "update_nodes_field_success": "L'attribut de nœud a bien été mis à jour.", + "update_nodes_scripted_field": "Éditer l'attribut de nœud scripté", + "update_nodes_scripted_field_success": "L'attribut de nœud scripté a été mis à jour.", "update_nodes_success": "Le nœud a été mis à jour avec succès.", "update_this_edges": "Éditer ce lien", "update_this_nodes": "Éditer ce nœud" diff --git a/packages/gephi-lite/src/views/dataPage/dataTable/useDataTableColumns.tsx b/packages/gephi-lite/src/views/dataPage/dataTable/useDataTableColumns.tsx index 0cd8c16d..f8eaf81d 100644 --- a/packages/gephi-lite/src/views/dataPage/dataTable/useDataTableColumns.tsx +++ b/packages/gephi-lite/src/views/dataPage/dataTable/useDataTableColumns.tsx @@ -1,4 +1,4 @@ -import { DynamicItemDataSpec, ItemType } from "@gephi/gephi-lite-sdk"; +import { DynamicItemDataSpec, ItemType, Scalar } from "@gephi/gephi-lite-sdk"; import { ColumnDef, createColumnHelper } from "@tanstack/react-table"; import { isBoolean, size, values } from "lodash"; import { useCallback, useMemo } from "react"; @@ -7,6 +7,7 @@ import { useTranslation } from "react-i18next"; import Dropdown from "../../../components/Dropdown"; import { ThreeDotsVerticalIcon } from "../../../components/common-icons"; import { AttributeLabel } from "../../../components/data/Attribute"; +import { CreateScriptedFieldModelModal } from "../../../components/data/CreateScriptedFieldModel"; import { EdgeComponentById } from "../../../components/data/Edge"; import { EditFieldModelModal } from "../../../components/data/EditFieldModel"; import { NodeComponentById } from "../../../components/data/Node"; @@ -236,7 +237,10 @@ export const useDataTableColumns = (itemIDs: string[]) => { // Dataset-specific columns; ...fields.map>((field, i, a) => ({ id: `field::${field.id}`, - accessorFn: ({ data }: ItemRow) => data[field.id], + // Formula (scripted) fields are computed on the fly and live in the dynamic data channel + // (spread at the row's top level), while regular fields are stored in `data`: + accessorFn: (row: ItemRow) => + field.script ? (row as unknown as Record)[field.id] : row.data[field.id], header: ({ header }) => ( <> @@ -257,7 +261,12 @@ export const useDataTableColumns = (itemIDs: string[]) => { { label: t("datatable.modify_column"), onClick: () => { - openModal({ component: EditFieldModelModal, arguments: { fieldModelId: field.id, type } }); + if (field.script) + openModal({ + component: CreateScriptedFieldModelModal, + arguments: { type, fieldModelId: field.id }, + }); + else openModal({ component: EditFieldModelModal, arguments: { fieldModelId: field.id, type } }); }, }, { @@ -353,6 +362,8 @@ export const useDataTableColumns = (itemIDs: string[]) => { id={props.row.getValue("id")} field={field} value={props.row.getValue(`field::${field.id}`)} + // Formula fields are computed, hence read-only in the table: + readOnly={!!field.script} /> ), })), diff --git a/packages/sdk/src/graph/types.ts b/packages/sdk/src/graph/types.ts index e2b15b18..ba39afd2 100644 --- a/packages/sdk/src/graph/types.ts +++ b/packages/sdk/src/graph/types.ts @@ -105,6 +105,12 @@ export type FieldModelTypeSpecCollection = { }; export type FieldModelTypeSpec = FieldModelTypeSpecCollection[keyof FieldModelAbstraction]; +/** + * A user-provided function that computes the value of a "formula" (scripted) field for a given item. + * It receives the item id, its (static) attributes, its index in the graph and the full graph instance. + */ +export type FieldScriptFunction = (id: string, attributes: ItemData, index: number, graph: FullGraph) => Scalar; + export type FieldModel< T extends ItemType = ItemType, Dynamic extends boolean = false, @@ -116,6 +122,9 @@ export type FieldModel< dynamic?: Dynamic; // Value used to initialize this attribute's field when creating a new node/edge: defaultValue?: Scalar; + // When set, this field is a "formula" field: its value is (re)computed for each item by this + // function instead of being stored. It is persisted with the dataset and recomputed on the fly. + script?: FieldScriptFunction; } & FieldModelTypeSpecCollection[K]; export type FieldModelWithStats = FieldModel & { From f43cea1f6bb3edb23342f07f411597640fc95517 Mon Sep 17 00:00:00 2001 From: Claude Date: Thu, 16 Jul 2026 04:07:12 +0000 Subject: [PATCH 034/116] =?UTF-8?q?Export=20GEXF=20:=20mat=C3=A9rialiser?= =?UTF-8?q?=20les=20valeurs=20des=20colonnes=20formule?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit À l'export GEXF, les valeurs calculées des champs "formule" (script) sont désormais écrites comme attributs statiques sur le graphe exporté, afin d'apparaître dans le fichier GEXF. Cette matérialisation ne modifie que le graphe d'export construit à la volée par dataGraphToFullGraph : le dataset, les définitions de formule et la sauvegarde native .gephi-lite restent inchangés. --- packages/gephi-lite/src/core/file/index.ts | 28 +++++++++++++++++++--- 1 file changed, 25 insertions(+), 3 deletions(-) diff --git a/packages/gephi-lite/src/core/file/index.ts b/packages/gephi-lite/src/core/file/index.ts index ec41e725..17371f5c 100644 --- a/packages/gephi-lite/src/core/file/index.ts +++ b/packages/gephi-lite/src/core/file/index.ts @@ -1,4 +1,4 @@ -import { gephiLiteStringify } from "@gephi/gephi-lite-sdk"; +import { FieldModel, ItemData, ItemType, Scalar, gephiLiteStringify } from "@gephi/gephi-lite-sdk"; import { Producer, asyncAction, atom, producerToAction } from "@ouestware/atoms"; import Graph from "graphology"; import { write } from "graphology-gexf"; @@ -40,12 +40,34 @@ function geFullDataGraph(): Graph { // get the full graph const graphDataset = graphDatasetAtom.get(); const filteredGraph = filteredGraphAtom.get(); - const dynamicNodeData = dynamicItemDataAtom.get(); + const dynamicItemData = dynamicItemDataAtom.get(); const fullDataGraph = dataGraphToFullGraph(graphDataset, filteredGraph); // apply current appearance on the graph const visualGetters = visualGettersAtom.get(); - applyVisualProperties(fullDataGraph, graphDataset, dynamicNodeData, visualGetters); + applyVisualProperties(fullDataGraph, graphDataset, dynamicItemData, visualGetters); + + // Materialize the computed values of "formula" (scripted) fields as static attributes on the + // exported graph. This makes them part of exports (eg. GEXF), while only mutating this freshly + // built export graph — the dataset (and thus the formula definitions and the native gephi-lite + // save) are left untouched. + const materializeScriptFields = (itemType: ItemType, fields: FieldModel[], dynamicData: Record) => { + const scriptFields = fields.filter((f) => f.script); + if (!scriptFields.length) return; + const itemIds = itemType === "nodes" ? fullDataGraph.nodes() : fullDataGraph.edges(); + const setAttribute = (id: string, key: string, value: Scalar) => + itemType === "nodes" + ? fullDataGraph.setNodeAttribute(id, key, value) + : fullDataGraph.setEdgeAttribute(id, key, value); + itemIds.forEach((id) => { + scriptFields.forEach((field) => { + const value = dynamicData[id]?.[field.id]; + if (value !== undefined && value !== null) setAttribute(id, field.id, value); + }); + }); + }; + materializeScriptFields("nodes", graphDataset.nodeFields, dynamicItemData.dynamicNodeData); + materializeScriptFields("edges", graphDataset.edgeFields, dynamicItemData.dynamicEdgeData); return fullDataGraph; } From ac596e4f626130e9725150686bb744d6ca240226 Mon Sep 17 00:00:00 2001 From: Claude Date: Thu, 16 Jul 2026 05:34:38 +0000 Subject: [PATCH 035/116] =?UTF-8?q?Zoom=20sur=20un=20edge=20:=20diff=C3=A9?= =?UTF-8?q?rer=20le=20cadrage=20sur=20mobile=20(candidat)?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Sur mobile (< 576px), sélectionner un item déploie un panneau qui prend 50% de la hauteur ; la zone graphe (.filler) rétrécit via une transition CSS. Comme le bouton "Localiser" fait select() puis focus() de façon synchrone, le cadrage était calculé sur la bande pleine hauteur (avant déploiement du panneau), puis le panneau recouvrait la moitié basse. focusCameraOnEdges attend désormais que la zone graphe se stabilise avant de cadrer, pour tenir compte du panneau. Sur desktop rien ne change (la bande est déjà stable, le cadrage est immédiat). Correctif candidat à valider sur un vrai appareil Android. --- packages/gephi-lite/src/core/sigma/index.ts | 36 ++++++++++++++++++--- 1 file changed, 32 insertions(+), 4 deletions(-) diff --git a/packages/gephi-lite/src/core/sigma/index.ts b/packages/gephi-lite/src/core/sigma/index.ts index 0905e877..f35f8caf 100644 --- a/packages/gephi-lite/src/core/sigma/index.ts +++ b/packages/gephi-lite/src/core/sigma/index.ts @@ -183,6 +183,31 @@ const ANIMATION_DURATION = 500; const HIGHLIGHT_DURATION = 2000; let focusTimeOutId: number | null = null; +/** + * Runs `run` once the graph area (".filler") has stopped resizing. + * + * On mobile, selecting an item deploys a panel that takes half of the height, and the ".filler" + * (the visible graph band) shrinks over a CSS transition. Since selecting + focusing happen + * synchronously, the framing would otherwise be computed against the *pre-transition* band (full + * height) and end up hidden behind the panel / zoomed for the wrong area. We therefore wait for the + * band to settle before framing. On desktop nothing is transitioning, so it runs almost immediately. + */ +function runWhenGraphBandSettled(run: () => void) { + const getHeight = () => document.querySelector(".filler")?.getBoundingClientRect().height ?? 0; + const start = performance.now(); + let lastHeight = getHeight(); + let stableFrames = 0; + const tick = () => { + const height = getHeight(); + stableFrames = Math.abs(height - lastHeight) < 0.5 ? stableFrames + 1 : 0; + lastHeight = height; + // Settled once the height held steady for a couple of frames, or give up after ~500ms: + if (stableFrames >= 2 || performance.now() - start > 500) run(); + else requestAnimationFrame(tick); + }; + requestAnimationFrame(tick); +} + /** * Computes a camera state that frames the given nodes so that their disks AND their labels * fit entirely inside the *visible* part of the graph. @@ -339,10 +364,13 @@ export function focusCameraOnEdges(ids: string[]) { if (!endpoints.size) return; // Frame all the edges so that their endpoints' disks and labels fit entirely within the - // viewport visible between the panels. - sigma - .getCamera() - .animate(getCameraStateToFrameNodes(sigma, Array.from(endpoints)), { duration: ANIMATION_DURATION }); + // viewport visible between the panels. We wait for the graph band to settle first, so on mobile + // the framing accounts for the selection panel that just opened (and halved the visible height). + runWhenGraphBandSettled(() => + sigma + .getCamera() + .animate(getCameraStateToFrameNodes(sigma, Array.from(endpoints)), { duration: ANIMATION_DURATION }), + ); // Higlight nodes during X seconds sigmaActions.setHighlightedNodes(endpoints); From ad9c9c23d358abf2c96524031cd2f4c16dce7115 Mon Sep 17 00:00:00 2001 From: Claude Date: Thu, 16 Jul 2026 05:53:34 +0000 Subject: [PATCH 036/116] =?UTF-8?q?Attributs=20num=C3=A9riques=20:=20stepp?= =?UTF-8?q?er=20+/=E2=88=92=20(spin=20buttons=20multiplateforme)?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Les navigateurs mobiles (Android, iOS) n'affichent pas les spin buttons natifs de , laissant les champs numériques sans moyen visible d'incrémenter/décrémenter. Ajout d'un composant NumberInput ([−] champ [+]) utilisé par l'éditeur numérique (table de données, formulaires de création/édition, valeur par défaut…). Les spin buttons natifs sont masqués en CSS pour éviter les doublons sur desktop : le stepper est ainsi identique sur toutes les plateformes. --- .../src/components/data/Attribute.tsx | 23 ++------ .../src/components/forms/NumberInput.tsx | 59 +++++++++++++++++++ packages/gephi-lite/src/styles/_forms.scss | 19 ++++++ 3 files changed, 82 insertions(+), 19 deletions(-) create mode 100644 packages/gephi-lite/src/components/forms/NumberInput.tsx diff --git a/packages/gephi-lite/src/components/data/Attribute.tsx b/packages/gephi-lite/src/components/data/Attribute.tsx index 46295dfc..e0d2f4e7 100644 --- a/packages/gephi-lite/src/components/data/Attribute.tsx +++ b/packages/gephi-lite/src/components/data/Attribute.tsx @@ -24,6 +24,7 @@ import ColorPicker, { InlineColorPicker } from "../ColorPicker"; import MessageTooltip from "../MessageTooltip"; import { FieldModelIcon, InvalidDataIcon } from "../common-icons"; import { Checkbox } from "../forms/Checkbox"; +import { NumberInput } from "../forms/NumberInput"; import { CreatableSelect, StringOption, optionize } from "../forms/Select"; /** @@ -152,25 +153,9 @@ export const AttributeEditors: { } = { text: StringEditor, url: StringEditor, - number: ({ value, onChange, id, autoFocus, placeholder }) => { - const ref = useRef(null); - useEffect(() => { - if (ref.current && autoFocus) ref.current.focus(); - }, [autoFocus]); - - return ( - onChange(e.target.value ? +e.target.value : undefined)} - /> - ); - }, + number: ({ value, onChange, id, autoFocus, placeholder }) => ( + + ), boolean: ({ value, onChange, id, autoFocus }) => (