bidspm/.pre-commit-config.yaml at main · cpp-lln-lab/bidspm · GitHub

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---
exclude: "(?x)^(\ndemos/renaming/spm_2_bids_filenames.ipynb\n| demos/MoAE/moae_01_bids_app.ipynb\n)$\n"
ci:
    autoupdate_commit_msg: 'chore: update pre-commit hooks'
    autoupdate_schedule: quarterly
    autofix_commit_msg: 'style: pre-commit fixes'
repos:
-   repo: local
    hooks:
    -   id: mh_style
        name: mh_style
        entry: mh_style
        args:
        -   --process-slx
        -   --fix
        files: ^(.*\.(m|slx))$
        language: python
        additional_dependencies:
        -   miss_hit_core
    -   id: mh_metric
        name: mh_metric
        entry: mh_metric
        args:
        -   --ci
        files: ^(.*\.(m|slx))$
        language: python
        additional_dependencies:
        -   miss_hit_core
    -   id: mh_lint
        name: mh_lint
        entry: mh_lint
        files: ^(.*\.(m|slx))$
        language: python
        additional_dependencies:
        -   miss_hit
-   repo: https://github.com/pre-commit/pre-commit-hooks
    rev: v6.0.0
    hooks:
    -   id: trailing-whitespace
    -   id: end-of-file-fixer
    -   id: check-yaml
    -   id: check-json
    -   id: check-added-large-files
    -   id: pretty-format-json
        args:
        -   --autofix
        -   --no-sort-keys
-   repo: https://github.com/macisamuele/language-formatters-pre-commit-hooks
    rev: v2.16.0
    hooks:
    -   id: pretty-format-toml
        args:
        -   --autofix
        -   --indent
        -   '4'
-   repo: https://github.com/jumanjihouse/pre-commit-hook-yamlfmt
    rev: 0.2.3
    hooks:
    -   id: yamlfmt
        args:
        -   --mapping
        -   '4'
        -   --sequence
        -   '4'
        -   --offset
        -   '0'
-   repo: https://github.com/pre-commit/pygrep-hooks
    rev: v1.10.0
    hooks:
    -   id: rst-backticks
    -   id: rst-inline-touching-normal
-   repo: https://github.com/pycqa/isort
    rev: 8.0.1
    hooks:
    -   id: isort
        args:
        -   --profile
        -   black
-   repo: https://github.com/psf/black-pre-commit-mirror
    rev: 26.3.1
    hooks:
    -   id: black
        args:
        -   --config=pyproject.toml
-   repo: https://github.com/asottile/pyupgrade
    rev: v3.21.2
    hooks:
    -   id: pyupgrade
        args:
        -   --py38-plus
-   repo: https://github.com/pre-commit/mirrors-mypy
    rev: v1.20.0
    hooks:
    -   id: mypy
        files: bidspm
        args:
        -   --config-file
        -   pyproject.toml
-   repo: https://github.com/hadolint/hadolint
    rev: v2.14.0
    hooks:
    -   id: hadolint-docker
        name: Lint Dockerfiles
        description: Runs hadolint Docker image to lint Dockerfiles
        language: docker_image
        types:
        -   dockerfile
        entry: ghcr.io/hadolint/hadolint hadolint
-   repo: https://github.com/codespell-project/codespell
    rev: v2.4.2
    hooks:
    -   id: codespell
        args:
        -   --toml
        -   pyproject.toml
        additional_dependencies:
        -   tomli
-   repo: https://github.com/pyCQA/flake8
    rev: 7.3.0
    hooks:
    -   id: flake8
        args:
        -   --config
        -   .flake8
        -   --verbose
        -   src
        -   tools
        -   docs
        -   demos
        -   tests
        additional_dependencies:
        -   flake8-docstrings
        -   flake8-use-fstring
        -   flake8-bugbear