From ed926f3c4e627342e04d6146e7a7478ae354007c Mon Sep 17 00:00:00 2001 From: Yaroslav Halchenko Date: Thu, 30 Jul 2026 16:12:36 -0400 Subject: [PATCH 1/5] webinars: link each webinar to ReproTube backup alongside YouTube MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Point the webinars page at ReproTube — an offline, self-sufficient backup of the ReproNim YouTube channel produced with the [annextube](https://github.com/con/annextube) tool and hosted at https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/ . The ReproTube instance ships a client-side viewer with full-text search over video captions, which is the main reason for surfacing it here in addition to the existing YouTube / Slides links. Changes to `content/about/webinars.md`: - Intro: replace the single-sentence "Browse our complete collections…" paragraph with a 3-item list, adding a ReproTube entry that links to the [ReproNim webinar playlist backup](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/?playlists=PLs3CA4ShM1DUX0nTMKfoB8Z6kdrZpByLa) and calls out both the caption search and the annextube tooling that produced it. - Per-webinar entries: transform each existing `[Video …](YouTube-URL)` link to `Video …: [YouTube](YouTube-URL), [ReproTube](ReproTube-URL)` across all 62 recorded webinars. The ReproTube URL uses the hash-routed video-detail view `…/web/#/video/`. Original label wording (Video Presentation / Video presentation / Video Recording / Video) preserved verbatim; original YouTube URLs (including `?v=…&feature=…&list=…` variants) kept as-is; only the 11-char YouTube video ID is used for the ReproTube link. - Fixed two pre-existing typos that would otherwise have produced broken ReproTube links: - `https://youtu.be/7EvcrEQdCV80` → `…/7EvcrEQdCV8` (Mar 2025 entry; extra trailing `0`, real YouTube ID is 11 chars). - `[Video Presentation(https://youtu.be/d_xHVSW8oZQ)` → `[Video Presentation](…)` (Oct 2024 entry; missing `]`). All 62 webinar video IDs on the page were cross-checked against `https://datasets.datalad.org/repronim/ReproTube/ReproNim/videos/videos.tsv` before the ReproTube link was emitted, so every added ReproTube link points to a video that is actually in the archive. Co-Authored-By: Claude Code 2.1.220 / Claude Opus 4.7 --- content/about/webinars.md | 130 ++++++++++++++++++++------------------ 1 file changed, 67 insertions(+), 63 deletions(-) diff --git a/content/about/webinars.md b/content/about/webinars.md index a256c45..34a51fe 100644 --- a/content/about/webinars.md +++ b/content/about/webinars.md @@ -7,7 +7,11 @@ weight: 50 The ReproNim webinar series introduces important efforts in reproducibility featuring presentations by both ReproNim and guest investigators. -Browse our complete collections of ReproNim webinar [videos](https://www.youtube.com/channel/UCGX2sXmEgDuUGWHDSiT1NdQ/videos) and [slides](https://drive.google.com/drive/folders/1xqgWtghspJtxa8hmC4d6_zUPCgpe4fp-). +Browse our complete collection of ReproNim webinars via: + +- [YouTube channel](https://www.youtube.com/channel/UCGX2sXmEgDuUGWHDSiT1NdQ/videos) — original videos. +- [Slides](https://drive.google.com/drive/folders/1xqgWtghspJtxa8hmC4d6_zUPCgpe4fp-) — Google Drive folder. +- [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/?playlists=PLs3CA4ShM1DUX0nTMKfoB8Z6kdrZpByLa) — offline backup of the ReproNim webinar playlist, with full-text caption search, built with [annextube](https://github.com/con/annextube). ## Upcoming webinars @@ -30,7 +34,7 @@ ReproNim faculty member [Jeffrey Grethe](https://profiles.ucsd.edu/jeffrey.greth Presentation Title: “ReproNim and NIDM: Making FAIR Neuroimaging Data Queryable—Structured Data Meets AI.” -[Video Presentation](https://youtu.be/1gM3OzAkePg) and [Slides](https://drive.google.com/drive/folders/1LYx5jmv5zhtSxnzIvGbCVpr2iTIRhg7t) are now available. +Video Presentation: [YouTube](https://youtu.be/1gM3OzAkePg), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/1gM3OzAkePg) and [Slides](https://drive.google.com/drive/folders/1LYx5jmv5zhtSxnzIvGbCVpr2iTIRhg7t) are now available. ### Friday, April 3, 2026 at 2pm ET @@ -39,7 +43,7 @@ ReproNim faculty member [Satra Ghosh](https://mcgovern.mit.edu/profile/satrajit- Presentation Title: “Undata - an AI-assisted unraveling of challenges around data models and schemas.” -[Video Presentation](https://youtu.be/AgI32-hCNsM) and [Slides](https://docs.google.com/presentation/d/1NmuRP-S9gpAZAjGt-l6k3-VMY27FBy6zweo75HahrCM/edit?usp=sharing), as well as [Demo Screen Shots](https://drive.google.com/drive/folders/1cQKhWHYHWPj5gQQrbytnrv9TOb4nFa_f) are now available. +Video Presentation: [YouTube](https://youtu.be/AgI32-hCNsM), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/AgI32-hCNsM) and [Slides](https://docs.google.com/presentation/d/1NmuRP-S9gpAZAjGt-l6k3-VMY27FBy6zweo75HahrCM/edit?usp=sharing), as well as [Demo Screen Shots](https://drive.google.com/drive/folders/1cQKhWHYHWPj5gQQrbytnrv9TOb4nFa_f) are now available. ### Friday, March 6, 2026 at 2pm ET @@ -50,7 +54,7 @@ Kamil is a distinguished leader in the field for both the development and applic Presentation Title: “Century of spin; from electrons to precision fMRI.” -[Video Presentation](https://youtu.be/NWooJ9u2jIo) is now available. +Video Presentation: [YouTube](https://youtu.be/NWooJ9u2jIo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/NWooJ9u2jIo) is now available. ### Friday, February 6, 2026 at 2pm ET @@ -58,7 +62,7 @@ ReproNim faculty member [Yaroslav Halchenko](https://pbs.dartmouth.edu/people/ya Presentation Title: “YODA: Structure your studies, observable and reproducible they become.” -[Video Presentation](https://youtu.be/1XbTbJ_P2x0) is now available. +Video Presentation: [YouTube](https://youtu.be/1XbTbJ_P2x0), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/1XbTbJ_P2x0) is now available. ### Friday, January 2, 2026 ~ No Webinar ~ Happy New Year! @@ -68,7 +72,7 @@ Presentation Title: “YODA: Structure your studies, observable and reproducible Presentation Title: “Dynamic brain-body states: implications for reproducible and interpretable neuroimaging.” -[Video Presentation](https://youtu.be/jzPISfLsaPo) and [Slides](https://neurdylab.github.io/physai/assets/slides/repronim.pdf) are now available. +Video Presentation: [YouTube](https://youtu.be/jzPISfLsaPo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/jzPISfLsaPo) and [Slides](https://neurdylab.github.io/physai/assets/slides/repronim.pdf) are now available. ### Friday, November 7, 2025 at 2pm ET @@ -76,7 +80,7 @@ This month’s webinar, (re-scheduled from October 3), features a special discus Presentation Title: “Educational Resources for Reproducible Research in Neuroimaging and Neuroscience.” -[Video Presentation](https://youtu.be/5vEEmjUFDIY) is now available. +Video Presentation: [YouTube](https://youtu.be/5vEEmjUFDIY), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/5vEEmjUFDIY) is now available. ### Friday, October 3, 2025 at 2pm ET @@ -91,7 +95,7 @@ Anastasia is the lead PI of the center for Large-scale Imaging of Neural Circuit Presentation Title: “We're going to need a bigger boat: Scaling human neuroimaging to meso- and microscopic resolutions.” -[Video Recording](https://youtu.be/4yhXbzrX0X8) is now available. +Video Recording: [YouTube](https://youtu.be/4yhXbzrX0X8), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/4yhXbzrX0X8) is now available. ### July and August 2025 ~ SUMMER HIATUS ~ @@ -105,32 +109,32 @@ Happy Summer Holidays to All! [Stephanie Noble](https://cos.northeastern.edu/people/stephanie-noble/) (Northeastern University, and Director, [NeuroPRISM Lab](https://neuroprismlab.github.io/) joins us with a special guest presentation on "Towards more reliable and valid human brain mapping research" based on her highly interdisciplinary consideration of precision measurement and individually centered brain-behavior data in combination with best practices for machine learning and big data analysis. -[Video Presentation](https://youtu.be/GD37flpGlhE) is now available. +Video Presentation: [YouTube](https://youtu.be/GD37flpGlhE), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/GD37flpGlhE) is now available. ### Friday, May 2, 2025 at 2pm EDT We welcome [Guray Erus](https://www.med.upenn.edu/cbica/aibil/gerus.html) (UPenn/Perelman Sch. Med), Director of Research at the [Center for Biomedical Image Computing & Analytics](https://www.med.upenn.edu/cbica/faculty.html) for an introduction to the [NiChart platform](https://neuroimagingchart.com) in his presentation:“NiChart: Neuroimaging Chart of AI-based Imaging Biomarkers.” -[Video Presentation](https://youtu.be/TIuh7NEd2tM) is now available. +Video Presentation: [YouTube](https://youtu.be/TIuh7NEd2tM), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/TIuh7NEd2tM) is now available. ### Friday, April 4, 2025 at 2pm EDT ReproNim/INCF Fellowship Alum [Chris Rorden](https://github.com/neurolabusc) is our featured speaker this month, with a presentation on [NiiVue Visualization](https://reporter.nih.gov/search/dNfNq05F10WBBWtJH_hp0A/project-details/10724895), a highly innovative web-based tool for community driven data visualization for all stages of neuroimaging. -[Video Presentation](https://youtu.be/EElbiLkF0Yk) and [Slides](https://drive.google.com/drive/folders/1whQjhHIvvxfxYk-Pjjdpum2wpV-vKhCG) are now available +Video Presentation: [YouTube](https://youtu.be/EElbiLkF0Yk), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/EElbiLkF0Yk) and [Slides](https://drive.google.com/drive/folders/1whQjhHIvvxfxYk-Pjjdpum2wpV-vKhCG) are now available ### Friday, March 7, 2025 at 2pm EST Our own [David Kennedy](https://profiles.umassmed.edu/display/130002), [PI, ReproNim](https://www.umassmed.edu/news/news-archives/2022/02/david-kennedy-awarded-$6-million-repronim-brain-imaging-grant),provides an update on “The State of the ReproNim 3.0 – The Way of the Future.” -[Video Presentation](https://youtu.be/7EvcrEQdCV80) and [Slides](https://docs.google.com/presentation/d/1iSDI-T65wa7GOy_txFwNpExu46xLslpbZDiGca1d9Jg/edit#slide=id.g2e3b9d04b56_0_20) are now available. +Video Presentation: [YouTube](https://youtu.be/7EvcrEQdCV8), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/7EvcrEQdCV8) and [Slides](https://docs.google.com/presentation/d/1iSDI-T65wa7GOy_txFwNpExu46xLslpbZDiGca1d9Jg/edit#slide=id.g2e3b9d04b56_0_20) are now available. ### Friday, February 7, 2025 at 2pm EST Special guest speaker [Melissa Kline Struhl](https://eccl.mit.edu/team-profiles/melissa-kline-struhl),(Research Scientist, MIT) joins us from the [Early Childhood Cognition Lab](https://eccl.mit.edu), where she serves as the Executive Director for the Lookit Team, and Director of [Children Helping Science](https://childrenhelpingscience.com). -[Video Presentation](https://youtu.be/dnMW_xipxJo) is now available. +Video Presentation: [YouTube](https://youtu.be/dnMW_xipxJo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/dnMW_xipxJo) is now available. ### Friday, January 3, 2025 @@ -140,239 +144,239 @@ No Webinar ~ Happy New Year! ### Friday, December 6, 2024 at 2pm EST Our featured speaker this month is ReproNim/INCF Fellowship alum [Johanna Bayer](https://nl.linkedin.com/in/johanna-bayer) who joins us from the [Predictive Clinical Neuroscience Group](https://predictiveclinicalneuroscience.com/),(Donders Institute and RadboudUMC, Netherlands). Johanna discusses normative modeling of neuroimaging data using the Predictive Clinical Neuroscience toolkit ([pcntoolkit](https://pcntoolkit.readthedocs.io/en/latest/)), in her presentation: "Normative modelling using the pcntoolkit – the what when and why.” -[Video Presentation](https://youtu.be/u_ZGVs_B6VY) and [Slides](https://github.com/likeajumprope/Repronim_webinar_normative_modelling) are now available +Video Presentation: [YouTube](https://youtu.be/u_ZGVs_B6VY), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/u_ZGVs_B6VY) and [Slides](https://github.com/likeajumprope/Repronim_webinar_normative_modelling) are now available ### Friday, November 1, 2024 at 2pm EDT We welcome [Stefano Moia](https://cris.maastrichtuniversity.nl/en/persons/stefano-moia) and colleagues Inês Esteves (Instituto Superior Técnico, Universidade de Lisboa - Lisbon), Rebecca Clemens (Northwestern University - Chicago), Mary Miedema (McGill University - Montreal), and Marie-Eve Picard (Université de Montréal - Montreal) for a special introduction to the [Physiopy](https://physiopy.github.io/) project: "The physiopy Community: working towards accessible and reproducible physiological data integration in neuroimaging studies" -[Video Presentation](https://youtu.be/4euIogu-TnA) is now available +Video Presentation: [YouTube](https://youtu.be/4euIogu-TnA), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/4euIogu-TnA) is now available ### Friday, October 4, 2024 at 2pm EDT Special guest speaker [Mike Milham](https://childmind.org/bio/michael-p-milham-md-phd/) (Child Mind Institute) discusses some of his very recent work with a presentation on "Moving beyond processing- and analysis-related variation in resting-state functional brain imaging." -[Video Presentation(https://youtu.be/d_xHVSW8oZQ) is now available +Video Presentation: [YouTube](https://youtu.be/d_xHVSW8oZQ), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/d_xHVSW8oZQ) is now available ### Friday, September 6, 2024 at 2pm EDT We are excited to kick off the new academic year with special guest speaker [Chris Mungall](https://biosciences.lbl.gov/profiles/chris-mungall/)! Chris joins us from Berkeley National Lab & Univ. California, where he leads the Biosystems Data Science group. Chris has very considerable expertise in large systems-level computation modeling, systems biology, data science, reusable and interoperable software, machine learning and knowledge graphs, and shares his remarkable perspective with a presentation on "Creating AI-ready datasets using LinkML and biomedical ontologies." -[Video Presentation](https://youtu.be/pH4hiUaknow) is now available +Video Presentation: [YouTube](https://youtu.be/pH4hiUaknow), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/pH4hiUaknow) is now available ### Summer hiatus ~ July-August 2024 ### Friday, June 7, 2024 ReproNim faculty member [Yaroslav Halchenko](https://pbs.dartmouth.edu/people/yaroslav-o-halchenko-0) discusses principles, methods, and automation for the scientific operations in reproducible neuroimaging experiments in: "SciOps from ReproNim/ReproFlow." -[Video presentation](https://youtu.be/SZ96Q6pwJzQ) and [Slides](https://datasets.datalad.org/repronim/artwork/talks/webinar-2024-reproflow/#/) are now available. +Video presentation: [YouTube](https://youtu.be/SZ96Q6pwJzQ), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/SZ96Q6pwJzQ) and [Slides](https://datasets.datalad.org/repronim/artwork/talks/webinar-2024-reproflow/#/) are now available. ### Friday, May 3, 2024 ReproNim faculty member [JB Poline](https://www.mcgill.ca/neuro/jean-baptiste-poline-phd) (McGill) addresses the question of "How should the next generation of neuroinformatics be developed?" -[Video Presentation](https://youtu.be/MQ1mlZAOlHs) is now available. +Video Presentation: [YouTube](https://youtu.be/MQ1mlZAOlHs), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/MQ1mlZAOlHs) is now available. ### Friday, April 5, 2024 ReproNim team member [Yibei Chen](https://gablab.mit.edu/team/chen-yibei/) discusses current work on the ReproSchema project ( [Satra Ghosh](https://mcgovern.mit.edu/profile/satrajit-ghosh/), PI) with a presentation on "ReproSchema: Enhancing Research Reproducibility through Standardized Survey Data Collection.” -[Video Presentation](https://youtu.be/spMqo2dthr8) is now available. +Video Presentation: [YouTube](https://youtu.be/spMqo2dthr8), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/spMqo2dthr8) is now available. ### Friday, March 1, 2024 ReproNim faculty member [Jeffrey Grethe](https://www.linkedin.com/in/jgrethe) (UCSD) discusses the integrated application of ReproNim principles/methodologies with the NeuroImaging Data Model ([NIDM](http://nidm.nidash.org/)) specifically in support of the [FAIR](https://www.fdilab.org/about-fair) principles of interoperability and reusability of datasets: ReproNim and NIDM: Putting the (I)nteroperability and (R)eusability in FAIR. -[Video Presentation](https://youtu.be/JI3XQchuV-A) is now available. +Video Presentation: [YouTube](https://youtu.be/JI3XQchuV-A), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/JI3XQchuV-A) is now available. ### Friday, February 2, 2024 [Nikola Stikov](https://neuro.polymtl.ca/team/faculty/nikola-stikov) (University of Montreal) discusses [NeuroLibre](https://neurolibre.org/) and various aspects of publishing to include essential materials for reproducibility, in his presentation on NeuroLibre Reproducible Preprints: Going Beyond the PDF. -[Video Presentation](https://youtu.be/SrA-3MZ4tw4) is now available. +Video Presentation: [YouTube](https://youtu.be/SrA-3MZ4tw4), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/SrA-3MZ4tw4) is now available. ### Friday, January 5, 2024 - Canceled due to unforeseen circumstances ### Friday, December 1, 2023 [Daniel Asay](https://cbs.fas.harvard.edu/directory/6975/) joins us from the Harvard University Center for Brain Science. He discusses his work with Tim O'Keefe and colleagues on open-source quality control pipelines (XNAT 1.8+ plugins), particularly for diffusion weighted imaging, in his presentation: DWIQC: Diffusion Imaging Quality Control Pipeline -[Video Presentation](https://youtu.be/inKkwjSe4hY) and [Slides](https://drive.google.com/drive/folders/1CS8G1kFg2cdzFb7CYqgJXRcGsptBCya5) are now available. +Video Presentation: [YouTube](https://youtu.be/inKkwjSe4hY), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/inKkwjSe4hY) and [Slides](https://drive.google.com/drive/folders/1CS8G1kFg2cdzFb7CYqgJXRcGsptBCya5) are now available. ### Friday, November 3, 2023 We welcome [Anisha Keshavan](https://www.bighatbio.com/profiles/anisha-keshavan), Senior Data Scientist from Octave Bioscience, for a discussion of 'Reproducible Data Science Practices at Octave.' -[Video Presentation](https://youtu.be/DG6mUZ5XlS4) is now available +Video Presentation: [YouTube](https://youtu.be/DG6mUZ5XlS4), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/DG6mUZ5XlS4) is now available ### Friday, October 6, 2023 [Rudolph Pienaar](https://connects.catalyst.harvard.edu/Profiles/display/Person/54973) joins us (Harvard Medical School, Boston Children's Hospital) as guest speaker to kickoff our fall season! He shares his expertise and insights on the development and applications of an open source platform for computational research and medicine ([ChRIS](https://chrisproject.org/)), with a presentation on "The Challenges of Medical Computing in the Age of AI and Clouds – how ChRIS can help." -[Video Presentation](https://youtu.be/NTl-25tgKgY) and [Slides](http://fnndsc.childrens.harvard.edu/ChRIS/ReproNim) are now available. +Video Presentation: [YouTube](https://youtu.be/NTl-25tgKgY), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/NTl-25tgKgY) and [Slides](http://fnndsc.childrens.harvard.edu/ChRIS/ReproNim) are now available. ### July-September, 2023 ~ summer hiatus ### Friday, June 2, 2023 at 2pm EDT [Arno Klein](https://matter.childmind.org/) is our special guest speaker, joining us from the Child Mind Institute to share some of his intriguing and innovative technological developments aimed at better understanding of and treatment for childhood mental health disorders: [MindLogger platform](https://mindlogger.org/) for configurable data collection and interventions in research and clinical practice -[Video Presentation](https://youtu.be/zCbaCpoyUNo) are now available. +Video Presentation: [YouTube](https://youtu.be/zCbaCpoyUNo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/zCbaCpoyUNo) are now available. [Slides](https://drive.google.com/drive/folders/1fj0bmlBPw78bMd2vKacggq-_sDO4J9jS) are now available. ### Friday, May 5, 2023 We're excited to have [Angie Laird](https://nbclab.github.io/team/laird-angela), from the Neuroinformatics and Brain Connectivity group at Florida International University as our featured guest speaker. Angie shares her wisdom and very experienced perspective with a presentation on "Large, Open Datasets for Neuroimaging Research: Considerations for Reproducible and Responsible Data Use." -[Video Presentation](https://youtu.be/M-o1ha98quo) and +Video Presentation: [YouTube](https://youtu.be/M-o1ha98quo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/M-o1ha98quo) and [Slides](https://drive.google.com/drive/folders/1Nc8UkebcdFgyDf8zFhg9dZ_cXpLmDcdH) are now available. ### Friday, April 7, 2023 We welcome ReproNim Fellowship graduate [Sook-Lei Liew](https://chan.usc.edu/people/faculty/Sook-Lei_Liew) for a presentation on her pioneering work in reproducibility education for researchers in the medical rehabilitation community: "ReproRehab: Building a reproducible rehabilitation research education program for the medical rehabilitation community." -[Video Presentation](https://youtu.be/0zsRvNuuJLI) and +Video Presentation: [YouTube](https://youtu.be/0zsRvNuuJLI), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/0zsRvNuuJLI) and [Slides](https://drive.google.com/drive/folders/1AHrBekaXfC2QEFCdtQEFcx6gqwIXlt2a) are now available. ### Friday, March 3, 2023 Special guest speaker [Pradeep Raamana](https://crossinvalidation.com/about-pradeep/) joins us from the University of Pittsburgh to share his expertise in the development of automated QA tools for MRI protocol compliance, including open datasets, in Neuroimaging Quality Control (niQC): critical yet overlooked part of neuroscience." -[Video presentation](https://www.youtube.com/watch?v=kLsSrK1dhzM) is now available. Slides will be posted as soon as possible. +Video presentation: [YouTube](https://www.youtube.com/watch?v=kLsSrK1dhzM), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/kLsSrK1dhzM) is now available. Slides will be posted as soon as possible. ### Thursday, February 2, 2023 (live) and Friday, February 3 (re-broadcast) Special guest speaker [Steffen Bollmann](https://researchers.uq.edu.au/researcher/11402) joins us from University of Queensland with a presentation on [Neurodesk](https://www.neurodesk.org/): An accessible, flexible, and portable data analysis environment for reproducible neuroimaging. -[Video presentation](https://www.youtube.com/watch?v=HY-TqE6I2oo) is now available. +Video presentation: [YouTube](https://www.youtube.com/watch?v=HY-TqE6I2oo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/HY-TqE6I2oo) is now available. ### Friday, January 6, 2023 at 2pm EDT Our own [David Kennedy](https://profiles.umassmed.edu/display/130002) (ReproNim PI, UMass Chan Medical School) and members of the ReproNim Team discuss The State of the ReproNim: An Update on Center Activities -[Video presentation](https://youtu.be/1S0qWgnHkC8) and +Video presentation: [YouTube](https://youtu.be/1S0qWgnHkC8), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/1S0qWgnHkC8) and [Slides](https://docs.google.com/presentation/d/1MkW5heQLe-zKRoGOF2PgrF1XKIHaUCWBxE1-9SBFlTM/edit#slide=id.g154688a9f52_0_408) are now available. ### Friday, December 2, 2022 at 2pm EST Special guest [Keith Bush](https://uams-triprofiles.uams.edu/profiles/display/1802861) shares his wisdom and experience in implementing best practices and tools for enhancing the rigor and reproducibility of neuroimaging throughout the [Brain Imaging Research Center at the University of Arkansas for Medical Sciences](https://psychiatry.uams.edu/research/birc/?_ga=1.22816571.1823374017.1366814353) with a presentation on Transitioning a Neuroimaging Research Center to Open and Reproducible Science: A Case Study. See his [recent publication](https://www.frontiersin.org/articles/10.3389/fdata.2022.988084/full) on lessons learned! -[Video Presentation](https://youtu.be/zFr8DyTGhxQ) and +Video Presentation: [YouTube](https://youtu.be/zFr8DyTGhxQ), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/zFr8DyTGhxQ) and [Slides](https://drive.google.com/drive/folders/1B0EyiRsOP8-cBKD3SZDxGT9jZYCALlTC) are now available. ### Friday, November 4, 2022 at 2pm EDT ReproNim Collaborator [Mike Yassa](https://faculty.sites.uci.edu/myassa/), along with ReproNim faculty [David Keator](https://www.faculty.uci.edu/profile.cfm?faculty_id=6406), join us from UCI for a discussion of Early life adversity and brain development: A case study in imaging insights and challenges. -[Video Presentation](https://youtu.be/lYSe76-F9RM) is now available. +Video Presentation: [YouTube](https://youtu.be/lYSe76-F9RM), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/lYSe76-F9RM) is now available. ### Friday, October 7, 2022 at 2pm EDT We kick off the new academic year with a special presentation by ReproNim faculty member Maryann Martone ([UCSD](https://profiles.ucsd.edu/maryann.martone), [INCF](https://www.incf.org/cv/maryann-martone)), Reflections on progress in open and [FAIR](https://www.fdilab.org/team) neuroscience. Maryann discusses the 'hows and whys' for the current sea change in neuroscience towards an an open and FAIR approach to all aspects of research, and the implications and importance of this movement for neuroscience going forward. -[Video Presentation](https://youtu.be/hX_JnsZz-uY) is now available. +Video Presentation: [YouTube](https://youtu.be/hX_JnsZz-uY), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/hX_JnsZz-uY) is now available. ### Summer hiatus, Friday July 1 - Friday September 2, 2022 ### Friday, June 3, 2022 at 2pm EDT Special guest speaker [Ted Satterthwaite](https://www.pennlinc.io//team/Ted-Satterthwaite) joins us from UPenn's [Lifespan Informatics and Neuroimaging Center](https://www.pennlinc.io/research), with a presentation on Reproducible Image Curation and Processing for Large-scale Studies of Brain Development. -[Video Presentation](https://www.youtube.com/watch?v=6hgiH7BYKPs) is now available. +Video Presentation: [YouTube](https://www.youtube.com/watch?v=6hgiH7BYKPs), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/6hgiH7BYKPs) is now available. ### Friday, May 6, 2022 at 2pm EDT We welcome guest speaker [Eugenio Iglesias](https://lemon.martinos.org/pi/) from MGH/HMS and the Martinos Center for Biomedical Imaging, for a presentation on Synth*: Domain Randomization for out-of-the-box Brain Analysis with Enhanced Reproducibility. -[Video Presentation](https://www.youtube.com/watch?v=ET3Cw1Z-KUw) is now available. +Video Presentation: [YouTube](https://www.youtube.com/watch?v=ET3Cw1Z-KUw), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/ET3Cw1Z-KUw) is now available. ### Friday, April 1, 2022 at 2pm EDT [Tim Errington](https://metascience2021.org/speakers/errington/) joins us from the [Center for Open Science](https://www.cos.io/about/mission), with a presentation on Reproducibility in Preclinical Cancer Research - Lessons from the Reproducibility Project: Cancer Biology. This project underscores valuable insights and perspective on reproducibility that translate widely across scientific disciplines. -[Video Presentation](https://youtu.be/zJvzW82TtZU) and [Slides](https://osf.io/am9tp) are now available. +Video Presentation: [YouTube](https://youtu.be/zJvzW82TtZU), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/zJvzW82TtZU) and [Slides](https://osf.io/am9tp) are now available. ### Friday, March 4, 2022 at 2pm EST Guest speaker and ReproNim Affiliate [Peer Herholz](https://peerherholz.github.io/) discusses the topic of machine/deep learning with a presentation on "Everything Matters...also in Machine Learning: Some Pointers from ReproNim." -[Video Presentation](https://youtu.be/HwQzvQn2Who) is now available. Slides will be made available as soon as possible. +Video Presentation: [YouTube](https://youtu.be/HwQzvQn2Who), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/HwQzvQn2Who) is now available. Slides will be made available as soon as possible. ### Friday, February 4, 2022 at 2pm EST [Sebastian Urchs](https://github.com/surchs) joins us from McGill to discuss linked data principles and how they can be used to integrate data via metadata, with an illuminating presentation on Annotation 101: Linked Data 101 and the Semantic Web. -[Video Presentation](https://youtu.be/vP_9Fo29o_E) and +Video Presentation: [YouTube](https://youtu.be/vP_9Fo29o_E), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/vP_9Fo29o_E) and [Slides](https://docs.google.com/presentation/d/1AWNZsRTf9aZr3OBFY33Z38L8UIe1HzXWPTE8addXhUM/edit#slide=id.p) are now available. ### Friday, January 7, 2022 at 2pm EST Special guest speaker [Dorit Kliemann](https://psychology.uiowa.edu/people/dorit-kliemann) discusses Opportunities and Challenges of a preregistration: Functional Connectivity of the Amygdala in Autism. -[Video Presentation](https://youtu.be/SFPhXM7Pt2E) and +Video Presentation: [YouTube](https://youtu.be/SFPhXM7Pt2E), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/SFPhXM7Pt2E) and [Slides](https://drive.google.com/drive/folders/1cJmp_R7yJoDBaOUDosZ96ScCxZDEvknB) are now available. ### Friday, December 3, 2021 at 2pm EST We welcome guest speaker [Neda Jahanshad](https://profiles.sc-ctsi.org/neda.jahanshad) from the [ENIGMA](http://enigma.ini.usc.edu/) consortium for a presentation on The Evolving Landscape of Structured Multisite Neuroimaging Analyses: Observations and Opportunities from the ENIGMA Consortium. -[Video Presentation](https://youtu.be/lnQxe44NPyk) and +Video Presentation: [YouTube](https://youtu.be/lnQxe44NPyk), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/lnQxe44NPyk) and [Slides](https://docs.google.com/presentation/d/1SXKyfPNRmQMJUsp8viTywAqrXnoXSvcNBZ1TpvUKsA0/edit?usp=sharing) are now available. ### Friday, November 5, 2021 at 2pm EDT Guest speaker and ReproNim-INCF Fellow [Chris Rorden](https://cstar.sc.edu/chris-rorden/) joins us, with a presentation on Advanced Neuroimaging Visualization for Cloud Computing Ecosystems. -[Video Presentation](https://www.youtube.com/watch?v=7U8NZc_SrDI) and +Video Presentation: [YouTube](https://www.youtube.com/watch?v=7U8NZc_SrDI), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/7U8NZc_SrDI) and [Slides](https://docs.google.com/presentation/d/1zqGohKBFZrckVOVm1Fvj6ASXeeVoyL9k_PVg13eWcgM/edit#slide=id.gc6f9544c1_0_0) are available. ### Friday, October 1, 2021 at 2pm EDT We kick off our fall schedule with special guest speakers [David Van Essen](https://profiles.wustl.edu/en/persons/david-van-essen) and [Matt Glasser](https://neuroscience.wustl.edu/people/matthew-glasser/) on the topic of Reproducibility in Human Neuroimaging: Lessons from the Human Connectome Project. -[Video Presentation](https://youtu.be/TBvbneQvIOI) and +Video Presentation: [YouTube](https://youtu.be/TBvbneQvIOI), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/TBvbneQvIOI) and [Slides](https://docs.google.com/presentation/d/1_74sex8RuFiN389hv85Pv0eo-dpNVqCu/edit#slide=id.p1) are available. ### Friday, July 2, 2021 at 2pm EDT ReproNim collaborators [Michael O'Shea](https://www.med.unc.edu/childrensresearch/directory/michael-oshea-md-mph/) and the [ELGAN](https://elgan.fpg.unc.edu/) team discuss Neuroimaging Studies of Consequences of Extremely Premature Birth in partnership with our own David Kennedy for related discussion of ReproNim-enabled Diffusion Imaging Analyses -[Video](https://youtu.be/gSI_Do8OIqg) is now available, as are both [Mike O'Shea's Slides](https://drive.google.com/drive/folders/1e-3kNU6vEGm7DKeyDjf3vIKg34C7xoJf) and [David Kennedy's Slides](https://docs.google.com/presentation/d/1NdzNF88y5ZvlXZ5UVY_WSHHxi5pzC32dLNJ0IZRX1So/edit#slide=id.ge348a8c958_0_159) +Video: [YouTube](https://youtu.be/gSI_Do8OIqg), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/gSI_Do8OIqg) is now available, as are both [Mike O'Shea's Slides](https://drive.google.com/drive/folders/1e-3kNU6vEGm7DKeyDjf3vIKg34C7xoJf) and [David Kennedy's Slides](https://docs.google.com/presentation/d/1NdzNF88y5ZvlXZ5UVY_WSHHxi5pzC32dLNJ0IZRX1So/edit#slide=id.ge348a8c958_0_159) ### Friday, June 4, 2021 at 2pm EDT Guest speaker [Kristina Rapuano](https://www.betterup.com/blog/author/dr-kristina-rapuano-phd) joins us from Yale, with a presentation on “Large-scale restriction spectrum imaging and applications to pediatric obesity.” -[Video](https://youtu.be/vC6nJWciAbI) and +Video: [YouTube](https://youtu.be/vC6nJWciAbI), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/vC6nJWciAbI) and [Slides](https://drive.google.com/drive/folders/1WAXNZiylHsFncLSRRYDQ3HK7EIe7-yLb) are now available. ### Friday, May 7, 2021 at 2pm EDT Guest speaker [Ross Markello](https://rossmarkello.com/) joins us from McGill, with a presentation on "Investigating Variability in Biological Analyses of Brain Maps." -[Video](https://youtu.be/pMke3bzXpmc) and +Video: [YouTube](https://youtu.be/pMke3bzXpmc), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/pMke3bzXpmc) and [Slides](https://drive.google.com/drive/folders/1WAXNZiylHsFncLSRRYDQ3HK7EIe7-yLb) are now available. ### Friday, April 2, 2021 at 2pm EDT ReproNim collaborator [Anna Manelis](https://www.linkedin.com/in/anna-manelis-12184412) and ReproNim investigator Yaroslav Halchenko consider "The interplay between depression and obesity: using the ReproNim technologies to study public health problems." -[Video Presentation](https://youtu.be/KpgF18p3Woo) and +Video Presentation: [YouTube](https://youtu.be/KpgF18p3Woo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/KpgF18p3Woo) and [Slides](https://drive.google.com/drive/folders/1g8GJiMs_V545c-_Halq6c4BSam0ZiHN0) are now available. ### Friday, March 5, 2021 at 2pm EST Our own David Kennedy discusses the ReproPub, with a presentation on "IQ in Typical Development: Using ReproNim Technologies to Create a Re-executable Mega-Analysis of the Historical Literature." -[Video Presentation](https://youtu.be/RdJ_Ac1ZO8M) and +Video Presentation: [YouTube](https://youtu.be/RdJ_Ac1ZO8M), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/RdJ_Ac1ZO8M) and [Slides](https://docs.google.com/presentation/d/1ewdyPyQE0ebT4FqVrpqYNE4-SKBqg9YjtXiCI6CwDO0/edit#slide=id.gbf7462d4f7_0_0) are now available. ### Friday, February 5, 2021 at 2pm EST ReproNim investigators Jeffrey Grethe, David Keator, and Albert Crowley discuss how to create and utilize local metadata storage in "How to Build Your Own ReproPond," including various aspects of setup, local installation of BlazeGraph, and usage pointers. -[Video Presentation](https://www.youtube.com/watch?v=clIL2LJcHXY&feature=youtu.be) and [Slides](https://docs.google.com/presentation/d/1t7WWzuokzifwqAza9zaov_KxfKDO_Dqkwa-B8O5b4QA/edit#slide=id.p) are available. +Video Presentation: [YouTube](https://www.youtube.com/watch?v=clIL2LJcHXY&feature=youtu.be), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/clIL2LJcHXY) and [Slides](https://docs.google.com/presentation/d/1t7WWzuokzifwqAza9zaov_KxfKDO_Dqkwa-B8O5b4QA/edit#slide=id.p) are available. ### Friday, January 8, 2021 at 2pm EST ReproNim collaborator [Remi Gau](https://remi-gau.github.io/) discusses his computational approach to best practices in data analysis and sharing ([COBIDAS](https://www.humanbrainmapping.org/i4a/pages/index.cfm?pageid=3728)), combining [eCOBIDAS](https://brainhack.org/global2020/project/project_45/) with the use of ReproSchema to promote e-capture of experimental methods, in "eCOBIDAS: Because Methods Writing is Too Important (and Boring) to Let Humans Do It." -[Video Presentation](https://www.youtube.com/watch?v=bQd-e_v2iCc&feature=youtu.be) and [Slides](https://docs.google.com/presentation/d/1p4TyLePa44PWzqHhkNJOoAOj1xioiXuH/edit#slide=id.p1) are now available. +Video Presentation: [YouTube](https://www.youtube.com/watch?v=bQd-e_v2iCc&feature=youtu.be), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/bQd-e_v2iCc) and [Slides](https://docs.google.com/presentation/d/1p4TyLePa44PWzqHhkNJOoAOj1xioiXuH/edit#slide=id.p1) are now available. ### Friday, December 4, 2020 at 2pm EST ReproNim investigator Yaroslav Halchenko and his team focus on "Reproducible Execution of Data Collection/Processing." -[Video Presentation](https://youtu.be/dwBtrpI2iS0) and +Video Presentation: [YouTube](https://youtu.be/dwBtrpI2iS0), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/dwBtrpI2iS0) and [Slides](http://datasets.datalad.org/repronim/artwork/talks/webinar-2020-reprocomp/#/) are now available. ### Friday, November 6, 2020 at 2pm EST Special presentation! Our collaborators from the COINSTAC team, [Vince Calhoun](https://news.gsu.edu/2020/09/10/professor-vince-calhoun-named-director-of-center-for-advanced-brain-imaging/) and [Theo van Erp](https://cnlm.uci.edu/erp/) provide "An Overview of COINSTAC, with a Practical Application to Analysis." -[Video Presentation](https://www.youtube.com/watch?v=6lpsro_L9-Y) and [Slide Set 1 (Calhoun)](https://drive.google.com/drive/folders/1aMkeJDOwHlb192Y-rrP7cSr8M8iatxBk) and [Slide Set 2 (van Erp)](https://docs.google.com/presentation/d/1QdiHE7L-WIFybe3X6ZXB2eDcFAMqBo2m/edit#slide=id.p1) are now available. +Video Presentation: [YouTube](https://www.youtube.com/watch?v=6lpsro_L9-Y), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/6lpsro_L9-Y) and [Slide Set 1 (Calhoun)](https://drive.google.com/drive/folders/1aMkeJDOwHlb192Y-rrP7cSr8M8iatxBk) and [Slide Set 2 (van Erp)](https://docs.google.com/presentation/d/1QdiHE7L-WIFybe3X6ZXB2eDcFAMqBo2m/edit#slide=id.p1) are now available. ### Friday, October 2, 2020 at 2pm EDT ReproNim investigators and members of the ReproNim training team, JB Poline, Peer Herholz and David Kennedy discuss "How Would ReproNim do That? An introduction to the ReproNim 'How Would' Documents." -[Video Presentation](https://youtu.be/NPlAQdSDnBk) and +Video Presentation: [YouTube](https://youtu.be/NPlAQdSDnBk), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/NPlAQdSDnBk) and [Slides](https://docs.google.com/presentation/d/1Csj8TSZbagubWBK6FRujSqHQisUK47niwCKLl__MepY/edit?usp=sharing) are now available. ### Friday, September 4, 2020 at 2pm EDT ReproNim investigator Jeff Grethe presents "Drowning in data? Learn how to swim in ReproNim's data ponds and lakes." -[Video Presentation](https://youtu.be/VQ5t24mrvJI) and +Video Presentation: [YouTube](https://youtu.be/VQ5t24mrvJI), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/VQ5t24mrvJI) and [Slides](https://docs.google.com/presentation/d/1H4C_cBU9BE9EYFNyK8YBLQObzvq9iDztLWrqRIQTmgc/edit#slide=id.p) are now available. ### Friday, August 7, 2020 at 2pm EDT ReproNim investigator Satra Ghosh addresses the topic of "Harmonizing clinical and behavioral data collection through ReproSchema." -[Video Presentation](https://youtu.be/dDuP-Znso5Y) and +Video Presentation: [YouTube](https://youtu.be/dDuP-Znso5Y), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/dDuP-Znso5Y) and [Slides](https://docs.google.com/presentation/d/1H4C_cBU9BE9EYFNyK8YBLQObzvq9iDztLWrqRIQTmgc/edit#slide=id.p) are now available. ### Friday, July 3, 2020 ~ no meeting ~ happy summer! @@ -380,44 +384,44 @@ ReproNim investigator Satra Ghosh addresses the topic of "Harmonizing clinical a ### Friday, June 5, 2020 at 2pm EDT ReproNim investigator Yaroslav Halchenko presents "Version control your data and computation using containers, DataLad and ReproMan, and reproducible they be!" -Both the [Video Presentation](https://youtu.be/ix3lC6HGo-Q) and +Both the Video Presentation: [YouTube](https://youtu.be/ix3lC6HGo-Q), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/ix3lC6HGo-Q) and [Slides](https://docs.google.com/presentation/d/1NvjpsrbDHz_9WivvYICTh2U8Xak8TFk5nyWLiCdrHAU/edit?usp=sharing) are now available ### Friday, May 1, 2020 at 2pm EDT Guest speaker [Franco Pestilli](https://pestillilab.github.io/team/) (Associate Professor, University of Indiana), discusses "[brainlife.io](https://brainlife.io/) A free cloud platform for secure, reproducible neuroscience data management, analysis and visualization." -[Video Presentation](https://www.youtube.com/watch?v=5wW5Q0adRzE&feature=youtu.be) is now available +Video Presentation: [YouTube](https://www.youtube.com/watch?v=5wW5Q0adRzE&feature=youtu.be), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/5wW5Q0adRzE) is now available ### Friday, April 3, 2020 at 2pm EDT ReproNim investigator David Keator introduces "Tools and Techniques for BIDS Semantic Annotation and Query Across Datasets with NIDM" -Both the [Video Presentation](https://youtu.be/egFGzdna0eo), and +Both the Video Presentation: [YouTube](https://youtu.be/egFGzdna0eo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/egFGzdna0eo), and [Slides](https://drive.google.com/drive/u/0/folders/1avOWdtyBFWm2z3dPkvD7xxGqBq2ZdSnE) are now available ### Friday, March 6, 2020 at 2pm EST ReproNim investigator JB Poline discusses "How Do I Teach or Learn Reproducible Neuroimaging?" -Both the [Video Presentation](https://www.youtube.com/watch?v=2JJ0AqYH1iQ), and [Slides](https://docs.google.com/presentation/d/1vSrK3Du0iggi4x6NW1jUG-WsJJKIb8EnU9OeP2IpZAk/edit#slide=id.p1) are now available +Both the Video Presentation: [YouTube](https://www.youtube.com/watch?v=2JJ0AqYH1iQ), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/2JJ0AqYH1iQ), and [Slides](https://docs.google.com/presentation/d/1vSrK3Du0iggi4x6NW1jUG-WsJJKIb8EnU9OeP2IpZAk/edit#slide=id.p1) are now available ### Friday February 7, 2020 at 2pm EST ReproNim investigator Jeff Grethe introduces [InterLex](https://scicrunch.org/nidm-terms/interlex/dashboard) in his presentation "Damn it Jim, I am a researcher not an ontologist: Exploring and using terminologies" -Both the [Video Presentation](https://youtu.be/4qcRkqkTOFk), and +Both the Video Presentation: [YouTube](https://youtu.be/4qcRkqkTOFk), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/4qcRkqkTOFk), and [Slides](https://drive.google.com/open?id=1NhxbgmqT5Pd8n1SMqEhUjd5Fl6UAujOwL9am7icl61c) are available ### Friday, January 3, 2020 at 2pm EST ReproNim investigator Dorota Jarecka presents "Testing scientific workflows with Testkraken" -Both the [Video Presentation](https://www.youtube.com/watch?v=d5KbmuhvnwE) and +Both the Video Presentation: [YouTube](https://www.youtube.com/watch?v=d5KbmuhvnwE), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/d5KbmuhvnwE) and [Slides](https://drive.google.com/open?id=1QzcywXi1ThawyxJQLFVGG8hls9H0trOC) are available ### Friday, December 6, at 2pm EST ReproNim investigator Yaroslav Halchenko and colleagues present "Taking Control of your DICOM Data: ReproIn/HeuDiConv Tools" -Both the [Video Presentation](https://www.youtube.com/watch?v=j2SKX37-w4c&list=PLs3CA4ShM1DUX0nTMKfoB8Z6kdrZpByLa&index=5&t=0s) and +Both the Video Presentation: [YouTube](https://www.youtube.com/watch?v=j2SKX37-w4c&list=PLs3CA4ShM1DUX0nTMKfoB8Z6kdrZpByLa&index=5&t=0s), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/j2SKX37-w4c) and [Slides](https://docs.google.com/presentation/d/14UNWQVY49c9Xc-7sj1FkoILXnt-wYjW404oqT-FtCW8/edit#slide=id.p) are available ### Friday, November 1, at 2pm EDT Our own David Kennedy presents "State of the ReproNim: A High-Level Overview to Reproducibility in Neuroimaging Research" -Both the [Video Presentation](https://www.youtube.com/watch?v=CS_SP7iYuns&feature=youtu.be) and [Slides](https://drive.google.com/open?id=1ziznB86woaRhNLLYaqanuySqssNqhe4ZsyXcD5Rb5HM) are available +Both the Video Presentation: [YouTube](https://www.youtube.com/watch?v=CS_SP7iYuns&feature=youtu.be), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/CS_SP7iYuns) and [Slides](https://drive.google.com/open?id=1ziznB86woaRhNLLYaqanuySqssNqhe4ZsyXcD5Rb5HM) are available From fea2c3858a0c87e4bcdfc658c2b3ccb5de899102 Mon Sep 17 00:00:00 2001 From: Yaroslav Halchenko Date: Fri, 31 Jul 2026 18:20:37 -0400 Subject: [PATCH 2/5] Add slides to YODA --- content/about/webinars.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/content/about/webinars.md b/content/about/webinars.md index 34a51fe..dfd2e39 100644 --- a/content/about/webinars.md +++ b/content/about/webinars.md @@ -62,7 +62,7 @@ ReproNim faculty member [Yaroslav Halchenko](https://pbs.dartmouth.edu/people/ya Presentation Title: “YODA: Structure your studies, observable and reproducible they become.” -Video Presentation: [YouTube](https://youtu.be/1XbTbJ_P2x0), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/1XbTbJ_P2x0) is now available. +Video Presentation: [YouTube](https://youtu.be/1XbTbJ_P2x0), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/1XbTbJ_P2x0) and [Slides](https://datasets.datalad.org/centerforopenneuroscience/talks/2026-repronim-YODA-BIDS-webinar.html#/) are now available. ### Friday, January 2, 2026 ~ No Webinar ~ Happy New Year! From a1378ad385f98079631fd7acc5f2aa8a97149e7f Mon Sep 17 00:00:00 2001 From: Yaroslav Halchenko Date: Fri, 31 Jul 2026 18:24:26 -0400 Subject: [PATCH 3/5] [DATALAD RUNCMD] Avoid 'is now available' in whatever form since it is implied === Do not change lines below === { "chain": [], "cmd": "sed -i -e 's, *\\(are\\|is\\)* *\\(now \\)*available\\.*$,.,g' content/about/webinars.md", "exit": 0, "extra_inputs": [], "inputs": [], "outputs": [], "pwd": "." } ^^^ Do not change lines above ^^^ --- content/about/webinars.md | 118 +++++++++++++++++++------------------- 1 file changed, 59 insertions(+), 59 deletions(-) diff --git a/content/about/webinars.md b/content/about/webinars.md index dfd2e39..39e56a8 100644 --- a/content/about/webinars.md +++ b/content/about/webinars.md @@ -34,7 +34,7 @@ ReproNim faculty member [Jeffrey Grethe](https://profiles.ucsd.edu/jeffrey.greth Presentation Title: “ReproNim and NIDM: Making FAIR Neuroimaging Data Queryable—Structured Data Meets AI.” -Video Presentation: [YouTube](https://youtu.be/1gM3OzAkePg), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/1gM3OzAkePg) and [Slides](https://drive.google.com/drive/folders/1LYx5jmv5zhtSxnzIvGbCVpr2iTIRhg7t) are now available. +Video Presentation: [YouTube](https://youtu.be/1gM3OzAkePg), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/1gM3OzAkePg) and [Slides](https://drive.google.com/drive/folders/1LYx5jmv5zhtSxnzIvGbCVpr2iTIRhg7t). ### Friday, April 3, 2026 at 2pm ET @@ -43,7 +43,7 @@ ReproNim faculty member [Satra Ghosh](https://mcgovern.mit.edu/profile/satrajit- Presentation Title: “Undata - an AI-assisted unraveling of challenges around data models and schemas.” -Video Presentation: [YouTube](https://youtu.be/AgI32-hCNsM), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/AgI32-hCNsM) and [Slides](https://docs.google.com/presentation/d/1NmuRP-S9gpAZAjGt-l6k3-VMY27FBy6zweo75HahrCM/edit?usp=sharing), as well as [Demo Screen Shots](https://drive.google.com/drive/folders/1cQKhWHYHWPj5gQQrbytnrv9TOb4nFa_f) are now available. +Video Presentation: [YouTube](https://youtu.be/AgI32-hCNsM), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/AgI32-hCNsM) and [Slides](https://docs.google.com/presentation/d/1NmuRP-S9gpAZAjGt-l6k3-VMY27FBy6zweo75HahrCM/edit?usp=sharing), as well as [Demo Screen Shots](https://drive.google.com/drive/folders/1cQKhWHYHWPj5gQQrbytnrv9TOb4nFa_f). ### Friday, March 6, 2026 at 2pm ET @@ -54,7 +54,7 @@ Kamil is a distinguished leader in the field for both the development and applic Presentation Title: “Century of spin; from electrons to precision fMRI.” -Video Presentation: [YouTube](https://youtu.be/NWooJ9u2jIo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/NWooJ9u2jIo) is now available. +Video Presentation: [YouTube](https://youtu.be/NWooJ9u2jIo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/NWooJ9u2jIo). ### Friday, February 6, 2026 at 2pm ET @@ -62,7 +62,7 @@ ReproNim faculty member [Yaroslav Halchenko](https://pbs.dartmouth.edu/people/ya Presentation Title: “YODA: Structure your studies, observable and reproducible they become.” -Video Presentation: [YouTube](https://youtu.be/1XbTbJ_P2x0), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/1XbTbJ_P2x0) and [Slides](https://datasets.datalad.org/centerforopenneuroscience/talks/2026-repronim-YODA-BIDS-webinar.html#/) are now available. +Video Presentation: [YouTube](https://youtu.be/1XbTbJ_P2x0), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/1XbTbJ_P2x0) and [Slides](https://datasets.datalad.org/centerforopenneuroscience/talks/2026-repronim-YODA-BIDS-webinar.html#/). ### Friday, January 2, 2026 ~ No Webinar ~ Happy New Year! @@ -72,7 +72,7 @@ Video Presentation: [YouTube](https://youtu.be/1XbTbJ_P2x0), [ReproTube](https:/ Presentation Title: “Dynamic brain-body states: implications for reproducible and interpretable neuroimaging.” -Video Presentation: [YouTube](https://youtu.be/jzPISfLsaPo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/jzPISfLsaPo) and [Slides](https://neurdylab.github.io/physai/assets/slides/repronim.pdf) are now available. +Video Presentation: [YouTube](https://youtu.be/jzPISfLsaPo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/jzPISfLsaPo) and [Slides](https://neurdylab.github.io/physai/assets/slides/repronim.pdf). ### Friday, November 7, 2025 at 2pm ET @@ -80,7 +80,7 @@ This month’s webinar, (re-scheduled from October 3), features a special discus Presentation Title: “Educational Resources for Reproducible Research in Neuroimaging and Neuroscience.” -Video Presentation: [YouTube](https://youtu.be/5vEEmjUFDIY), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/5vEEmjUFDIY) is now available. +Video Presentation: [YouTube](https://youtu.be/5vEEmjUFDIY), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/5vEEmjUFDIY). ### Friday, October 3, 2025 at 2pm ET @@ -95,7 +95,7 @@ Anastasia is the lead PI of the center for Large-scale Imaging of Neural Circuit Presentation Title: “We're going to need a bigger boat: Scaling human neuroimaging to meso- and microscopic resolutions.” -Video Recording: [YouTube](https://youtu.be/4yhXbzrX0X8), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/4yhXbzrX0X8) is now available. +Video Recording: [YouTube](https://youtu.be/4yhXbzrX0X8), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/4yhXbzrX0X8). ### July and August 2025 ~ SUMMER HIATUS ~ @@ -115,26 +115,26 @@ Video Presentation: [YouTube](https://youtu.be/GD37flpGlhE), [ReproTube](https:/ We welcome [Guray Erus](https://www.med.upenn.edu/cbica/aibil/gerus.html) (UPenn/Perelman Sch. Med), Director of Research at the [Center for Biomedical Image Computing & Analytics](https://www.med.upenn.edu/cbica/faculty.html) for an introduction to the [NiChart platform](https://neuroimagingchart.com) in his presentation:“NiChart: Neuroimaging Chart of AI-based Imaging Biomarkers.” -Video Presentation: [YouTube](https://youtu.be/TIuh7NEd2tM), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/TIuh7NEd2tM) is now available. +Video Presentation: [YouTube](https://youtu.be/TIuh7NEd2tM), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/TIuh7NEd2tM). ### Friday, April 4, 2025 at 2pm EDT ReproNim/INCF Fellowship Alum [Chris Rorden](https://github.com/neurolabusc) is our featured speaker this month, with a presentation on [NiiVue Visualization](https://reporter.nih.gov/search/dNfNq05F10WBBWtJH_hp0A/project-details/10724895), a highly innovative web-based tool for community driven data visualization for all stages of neuroimaging. -Video Presentation: [YouTube](https://youtu.be/EElbiLkF0Yk), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/EElbiLkF0Yk) and [Slides](https://drive.google.com/drive/folders/1whQjhHIvvxfxYk-Pjjdpum2wpV-vKhCG) are now available +Video Presentation: [YouTube](https://youtu.be/EElbiLkF0Yk), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/EElbiLkF0Yk) and [Slides](https://drive.google.com/drive/folders/1whQjhHIvvxfxYk-Pjjdpum2wpV-vKhCG). ### Friday, March 7, 2025 at 2pm EST Our own [David Kennedy](https://profiles.umassmed.edu/display/130002), [PI, ReproNim](https://www.umassmed.edu/news/news-archives/2022/02/david-kennedy-awarded-$6-million-repronim-brain-imaging-grant),provides an update on “The State of the ReproNim 3.0 – The Way of the Future.” -Video Presentation: [YouTube](https://youtu.be/7EvcrEQdCV8), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/7EvcrEQdCV8) and [Slides](https://docs.google.com/presentation/d/1iSDI-T65wa7GOy_txFwNpExu46xLslpbZDiGca1d9Jg/edit#slide=id.g2e3b9d04b56_0_20) are now available. +Video Presentation: [YouTube](https://youtu.be/7EvcrEQdCV8), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/7EvcrEQdCV8) and [Slides](https://docs.google.com/presentation/d/1iSDI-T65wa7GOy_txFwNpExu46xLslpbZDiGca1d9Jg/edit#slide=id.g2e3b9d04b56_0_20). ### Friday, February 7, 2025 at 2pm EST Special guest speaker [Melissa Kline Struhl](https://eccl.mit.edu/team-profiles/melissa-kline-struhl),(Research Scientist, MIT) joins us from the [Early Childhood Cognition Lab](https://eccl.mit.edu), where she serves as the Executive Director for the Lookit Team, and Director of [Children Helping Science](https://childrenhelpingscience.com). -Video Presentation: [YouTube](https://youtu.be/dnMW_xipxJo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/dnMW_xipxJo) is now available. +Video Presentation: [YouTube](https://youtu.be/dnMW_xipxJo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/dnMW_xipxJo). ### Friday, January 3, 2025 @@ -144,88 +144,88 @@ No Webinar ~ Happy New Year! ### Friday, December 6, 2024 at 2pm EST Our featured speaker this month is ReproNim/INCF Fellowship alum [Johanna Bayer](https://nl.linkedin.com/in/johanna-bayer) who joins us from the [Predictive Clinical Neuroscience Group](https://predictiveclinicalneuroscience.com/),(Donders Institute and RadboudUMC, Netherlands). Johanna discusses normative modeling of neuroimaging data using the Predictive Clinical Neuroscience toolkit ([pcntoolkit](https://pcntoolkit.readthedocs.io/en/latest/)), in her presentation: "Normative modelling using the pcntoolkit – the what when and why.” -Video Presentation: [YouTube](https://youtu.be/u_ZGVs_B6VY), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/u_ZGVs_B6VY) and [Slides](https://github.com/likeajumprope/Repronim_webinar_normative_modelling) are now available +Video Presentation: [YouTube](https://youtu.be/u_ZGVs_B6VY), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/u_ZGVs_B6VY) and [Slides](https://github.com/likeajumprope/Repronim_webinar_normative_modelling). ### Friday, November 1, 2024 at 2pm EDT We welcome [Stefano Moia](https://cris.maastrichtuniversity.nl/en/persons/stefano-moia) and colleagues Inês Esteves (Instituto Superior Técnico, Universidade de Lisboa - Lisbon), Rebecca Clemens (Northwestern University - Chicago), Mary Miedema (McGill University - Montreal), and Marie-Eve Picard (Université de Montréal - Montreal) for a special introduction to the [Physiopy](https://physiopy.github.io/) project: "The physiopy Community: working towards accessible and reproducible physiological data integration in neuroimaging studies" -Video Presentation: [YouTube](https://youtu.be/4euIogu-TnA), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/4euIogu-TnA) is now available +Video Presentation: [YouTube](https://youtu.be/4euIogu-TnA), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/4euIogu-TnA). ### Friday, October 4, 2024 at 2pm EDT Special guest speaker [Mike Milham](https://childmind.org/bio/michael-p-milham-md-phd/) (Child Mind Institute) discusses some of his very recent work with a presentation on "Moving beyond processing- and analysis-related variation in resting-state functional brain imaging." -Video Presentation: [YouTube](https://youtu.be/d_xHVSW8oZQ), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/d_xHVSW8oZQ) is now available +Video Presentation: [YouTube](https://youtu.be/d_xHVSW8oZQ), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/d_xHVSW8oZQ). ### Friday, September 6, 2024 at 2pm EDT We are excited to kick off the new academic year with special guest speaker [Chris Mungall](https://biosciences.lbl.gov/profiles/chris-mungall/)! Chris joins us from Berkeley National Lab & Univ. California, where he leads the Biosystems Data Science group. Chris has very considerable expertise in large systems-level computation modeling, systems biology, data science, reusable and interoperable software, machine learning and knowledge graphs, and shares his remarkable perspective with a presentation on "Creating AI-ready datasets using LinkML and biomedical ontologies." -Video Presentation: [YouTube](https://youtu.be/pH4hiUaknow), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/pH4hiUaknow) is now available +Video Presentation: [YouTube](https://youtu.be/pH4hiUaknow), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/pH4hiUaknow). ### Summer hiatus ~ July-August 2024 ### Friday, June 7, 2024 ReproNim faculty member [Yaroslav Halchenko](https://pbs.dartmouth.edu/people/yaroslav-o-halchenko-0) discusses principles, methods, and automation for the scientific operations in reproducible neuroimaging experiments in: "SciOps from ReproNim/ReproFlow." -Video presentation: [YouTube](https://youtu.be/SZ96Q6pwJzQ), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/SZ96Q6pwJzQ) and [Slides](https://datasets.datalad.org/repronim/artwork/talks/webinar-2024-reproflow/#/) are now available. +Video presentation: [YouTube](https://youtu.be/SZ96Q6pwJzQ), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/SZ96Q6pwJzQ) and [Slides](https://datasets.datalad.org/repronim/artwork/talks/webinar-2024-reproflow/#/). ### Friday, May 3, 2024 ReproNim faculty member [JB Poline](https://www.mcgill.ca/neuro/jean-baptiste-poline-phd) (McGill) addresses the question of "How should the next generation of neuroinformatics be developed?" -Video Presentation: [YouTube](https://youtu.be/MQ1mlZAOlHs), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/MQ1mlZAOlHs) is now available. +Video Presentation: [YouTube](https://youtu.be/MQ1mlZAOlHs), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/MQ1mlZAOlHs). ### Friday, April 5, 2024 ReproNim team member [Yibei Chen](https://gablab.mit.edu/team/chen-yibei/) discusses current work on the ReproSchema project ( [Satra Ghosh](https://mcgovern.mit.edu/profile/satrajit-ghosh/), PI) with a presentation on "ReproSchema: Enhancing Research Reproducibility through Standardized Survey Data Collection.” -Video Presentation: [YouTube](https://youtu.be/spMqo2dthr8), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/spMqo2dthr8) is now available. +Video Presentation: [YouTube](https://youtu.be/spMqo2dthr8), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/spMqo2dthr8). ### Friday, March 1, 2024 ReproNim faculty member [Jeffrey Grethe](https://www.linkedin.com/in/jgrethe) (UCSD) discusses the integrated application of ReproNim principles/methodologies with the NeuroImaging Data Model ([NIDM](http://nidm.nidash.org/)) specifically in support of the [FAIR](https://www.fdilab.org/about-fair) principles of interoperability and reusability of datasets: ReproNim and NIDM: Putting the (I)nteroperability and (R)eusability in FAIR. -Video Presentation: [YouTube](https://youtu.be/JI3XQchuV-A), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/JI3XQchuV-A) is now available. +Video Presentation: [YouTube](https://youtu.be/JI3XQchuV-A), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/JI3XQchuV-A). ### Friday, February 2, 2024 [Nikola Stikov](https://neuro.polymtl.ca/team/faculty/nikola-stikov) (University of Montreal) discusses [NeuroLibre](https://neurolibre.org/) and various aspects of publishing to include essential materials for reproducibility, in his presentation on NeuroLibre Reproducible Preprints: Going Beyond the PDF. -Video Presentation: [YouTube](https://youtu.be/SrA-3MZ4tw4), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/SrA-3MZ4tw4) is now available. +Video Presentation: [YouTube](https://youtu.be/SrA-3MZ4tw4), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/SrA-3MZ4tw4). ### Friday, January 5, 2024 - Canceled due to unforeseen circumstances ### Friday, December 1, 2023 [Daniel Asay](https://cbs.fas.harvard.edu/directory/6975/) joins us from the Harvard University Center for Brain Science. He discusses his work with Tim O'Keefe and colleagues on open-source quality control pipelines (XNAT 1.8+ plugins), particularly for diffusion weighted imaging, in his presentation: DWIQC: Diffusion Imaging Quality Control Pipeline -Video Presentation: [YouTube](https://youtu.be/inKkwjSe4hY), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/inKkwjSe4hY) and [Slides](https://drive.google.com/drive/folders/1CS8G1kFg2cdzFb7CYqgJXRcGsptBCya5) are now available. +Video Presentation: [YouTube](https://youtu.be/inKkwjSe4hY), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/inKkwjSe4hY) and [Slides](https://drive.google.com/drive/folders/1CS8G1kFg2cdzFb7CYqgJXRcGsptBCya5). ### Friday, November 3, 2023 We welcome [Anisha Keshavan](https://www.bighatbio.com/profiles/anisha-keshavan), Senior Data Scientist from Octave Bioscience, for a discussion of 'Reproducible Data Science Practices at Octave.' -Video Presentation: [YouTube](https://youtu.be/DG6mUZ5XlS4), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/DG6mUZ5XlS4) is now available +Video Presentation: [YouTube](https://youtu.be/DG6mUZ5XlS4), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/DG6mUZ5XlS4). ### Friday, October 6, 2023 [Rudolph Pienaar](https://connects.catalyst.harvard.edu/Profiles/display/Person/54973) joins us (Harvard Medical School, Boston Children's Hospital) as guest speaker to kickoff our fall season! He shares his expertise and insights on the development and applications of an open source platform for computational research and medicine ([ChRIS](https://chrisproject.org/)), with a presentation on "The Challenges of Medical Computing in the Age of AI and Clouds – how ChRIS can help." -Video Presentation: [YouTube](https://youtu.be/NTl-25tgKgY), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/NTl-25tgKgY) and [Slides](http://fnndsc.childrens.harvard.edu/ChRIS/ReproNim) are now available. +Video Presentation: [YouTube](https://youtu.be/NTl-25tgKgY), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/NTl-25tgKgY) and [Slides](http://fnndsc.childrens.harvard.edu/ChRIS/ReproNim). ### July-September, 2023 ~ summer hiatus ### Friday, June 2, 2023 at 2pm EDT [Arno Klein](https://matter.childmind.org/) is our special guest speaker, joining us from the Child Mind Institute to share some of his intriguing and innovative technological developments aimed at better understanding of and treatment for childhood mental health disorders: [MindLogger platform](https://mindlogger.org/) for configurable data collection and interventions in research and clinical practice -Video Presentation: [YouTube](https://youtu.be/zCbaCpoyUNo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/zCbaCpoyUNo) are now available. -[Slides](https://drive.google.com/drive/folders/1fj0bmlBPw78bMd2vKacggq-_sDO4J9jS) are now available. +Video Presentation: [YouTube](https://youtu.be/zCbaCpoyUNo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/zCbaCpoyUNo). +[Slides](https://drive.google.com/drive/folders/1fj0bmlBPw78bMd2vKacggq-_sDO4J9jS). ### Friday, May 5, 2023 We're excited to have [Angie Laird](https://nbclab.github.io/team/laird-angela), from the Neuroinformatics and Brain Connectivity group at Florida International University as our featured guest speaker. Angie shares her wisdom and very experienced perspective with a presentation on "Large, Open Datasets for Neuroimaging Research: Considerations for Reproducible and Responsible Data Use." Video Presentation: [YouTube](https://youtu.be/M-o1ha98quo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/M-o1ha98quo) and -[Slides](https://drive.google.com/drive/folders/1Nc8UkebcdFgyDf8zFhg9dZ_cXpLmDcdH) are now available. +[Slides](https://drive.google.com/drive/folders/1Nc8UkebcdFgyDf8zFhg9dZ_cXpLmDcdH). ### Friday, April 7, 2023 We welcome ReproNim Fellowship graduate [Sook-Lei Liew](https://chan.usc.edu/people/faculty/Sook-Lei_Liew) for a presentation on her pioneering work in reproducibility education for researchers in the medical rehabilitation community: "ReproRehab: Building a reproducible rehabilitation research education program for the medical rehabilitation community." Video Presentation: [YouTube](https://youtu.be/0zsRvNuuJLI), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/0zsRvNuuJLI) and -[Slides](https://drive.google.com/drive/folders/1AHrBekaXfC2QEFCdtQEFcx6gqwIXlt2a) are now available. +[Slides](https://drive.google.com/drive/folders/1AHrBekaXfC2QEFCdtQEFcx6gqwIXlt2a). ### Friday, March 3, 2023 Special guest speaker [Pradeep Raamana](https://crossinvalidation.com/about-pradeep/) joins us from the University of Pittsburgh to share his expertise in the development of automated QA tools for MRI protocol compliance, including open datasets, in Neuroimaging Quality Control (niQC): critical yet overlooked part of neuroscience." @@ -235,46 +235,46 @@ Video presentation: [YouTube](https://www.youtube.com/watch?v=kLsSrK1dhzM), [Rep ### Thursday, February 2, 2023 (live) and Friday, February 3 (re-broadcast) Special guest speaker [Steffen Bollmann](https://researchers.uq.edu.au/researcher/11402) joins us from University of Queensland with a presentation on [Neurodesk](https://www.neurodesk.org/): An accessible, flexible, and portable data analysis environment for reproducible neuroimaging. -Video presentation: [YouTube](https://www.youtube.com/watch?v=HY-TqE6I2oo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/HY-TqE6I2oo) is now available. +Video presentation: [YouTube](https://www.youtube.com/watch?v=HY-TqE6I2oo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/HY-TqE6I2oo). ### Friday, January 6, 2023 at 2pm EDT Our own [David Kennedy](https://profiles.umassmed.edu/display/130002) (ReproNim PI, UMass Chan Medical School) and members of the ReproNim Team discuss The State of the ReproNim: An Update on Center Activities Video presentation: [YouTube](https://youtu.be/1S0qWgnHkC8), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/1S0qWgnHkC8) and -[Slides](https://docs.google.com/presentation/d/1MkW5heQLe-zKRoGOF2PgrF1XKIHaUCWBxE1-9SBFlTM/edit#slide=id.g154688a9f52_0_408) are now available. +[Slides](https://docs.google.com/presentation/d/1MkW5heQLe-zKRoGOF2PgrF1XKIHaUCWBxE1-9SBFlTM/edit#slide=id.g154688a9f52_0_408). ### Friday, December 2, 2022 at 2pm EST Special guest [Keith Bush](https://uams-triprofiles.uams.edu/profiles/display/1802861) shares his wisdom and experience in implementing best practices and tools for enhancing the rigor and reproducibility of neuroimaging throughout the [Brain Imaging Research Center at the University of Arkansas for Medical Sciences](https://psychiatry.uams.edu/research/birc/?_ga=1.22816571.1823374017.1366814353) with a presentation on Transitioning a Neuroimaging Research Center to Open and Reproducible Science: A Case Study. See his [recent publication](https://www.frontiersin.org/articles/10.3389/fdata.2022.988084/full) on lessons learned! Video Presentation: [YouTube](https://youtu.be/zFr8DyTGhxQ), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/zFr8DyTGhxQ) and -[Slides](https://drive.google.com/drive/folders/1B0EyiRsOP8-cBKD3SZDxGT9jZYCALlTC) are now available. +[Slides](https://drive.google.com/drive/folders/1B0EyiRsOP8-cBKD3SZDxGT9jZYCALlTC). ### Friday, November 4, 2022 at 2pm EDT ReproNim Collaborator [Mike Yassa](https://faculty.sites.uci.edu/myassa/), along with ReproNim faculty [David Keator](https://www.faculty.uci.edu/profile.cfm?faculty_id=6406), join us from UCI for a discussion of Early life adversity and brain development: A case study in imaging insights and challenges. -Video Presentation: [YouTube](https://youtu.be/lYSe76-F9RM), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/lYSe76-F9RM) is now available. +Video Presentation: [YouTube](https://youtu.be/lYSe76-F9RM), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/lYSe76-F9RM). ### Friday, October 7, 2022 at 2pm EDT We kick off the new academic year with a special presentation by ReproNim faculty member Maryann Martone ([UCSD](https://profiles.ucsd.edu/maryann.martone), [INCF](https://www.incf.org/cv/maryann-martone)), Reflections on progress in open and [FAIR](https://www.fdilab.org/team) neuroscience. Maryann discusses the 'hows and whys' for the current sea change in neuroscience towards an an open and FAIR approach to all aspects of research, and the implications and importance of this movement for neuroscience going forward. -Video Presentation: [YouTube](https://youtu.be/hX_JnsZz-uY), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/hX_JnsZz-uY) is now available. +Video Presentation: [YouTube](https://youtu.be/hX_JnsZz-uY), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/hX_JnsZz-uY). ### Summer hiatus, Friday July 1 - Friday September 2, 2022 ### Friday, June 3, 2022 at 2pm EDT Special guest speaker [Ted Satterthwaite](https://www.pennlinc.io//team/Ted-Satterthwaite) joins us from UPenn's [Lifespan Informatics and Neuroimaging Center](https://www.pennlinc.io/research), with a presentation on Reproducible Image Curation and Processing for Large-scale Studies of Brain Development. -Video Presentation: [YouTube](https://www.youtube.com/watch?v=6hgiH7BYKPs), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/6hgiH7BYKPs) is now available. +Video Presentation: [YouTube](https://www.youtube.com/watch?v=6hgiH7BYKPs), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/6hgiH7BYKPs). ### Friday, May 6, 2022 at 2pm EDT We welcome guest speaker [Eugenio Iglesias](https://lemon.martinos.org/pi/) from MGH/HMS and the Martinos Center for Biomedical Imaging, for a presentation on Synth*: Domain Randomization for out-of-the-box Brain Analysis with Enhanced Reproducibility. -Video Presentation: [YouTube](https://www.youtube.com/watch?v=ET3Cw1Z-KUw), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/ET3Cw1Z-KUw) is now available. +Video Presentation: [YouTube](https://www.youtube.com/watch?v=ET3Cw1Z-KUw), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/ET3Cw1Z-KUw). ### Friday, April 1, 2022 at 2pm EDT [Tim Errington](https://metascience2021.org/speakers/errington/) joins us from the [Center for Open Science](https://www.cos.io/about/mission), with a presentation on Reproducibility in Preclinical Cancer Research - Lessons from the Reproducibility Project: Cancer Biology. This project underscores valuable insights and perspective on reproducibility that translate widely across scientific disciplines. -Video Presentation: [YouTube](https://youtu.be/zJvzW82TtZU), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/zJvzW82TtZU) and [Slides](https://osf.io/am9tp) are now available. +Video Presentation: [YouTube](https://youtu.be/zJvzW82TtZU), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/zJvzW82TtZU) and [Slides](https://osf.io/am9tp). ### Friday, March 4, 2022 at 2pm EST Guest speaker and ReproNim Affiliate [Peer Herholz](https://peerherholz.github.io/) discusses the topic of machine/deep learning with a presentation on "Everything Matters...also in Machine Learning: Some Pointers from ReproNim." @@ -285,31 +285,31 @@ Video Presentation: [YouTube](https://youtu.be/HwQzvQn2Who), [ReproTube](https:/ [Sebastian Urchs](https://github.com/surchs) joins us from McGill to discuss linked data principles and how they can be used to integrate data via metadata, with an illuminating presentation on Annotation 101: Linked Data 101 and the Semantic Web. Video Presentation: [YouTube](https://youtu.be/vP_9Fo29o_E), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/vP_9Fo29o_E) and -[Slides](https://docs.google.com/presentation/d/1AWNZsRTf9aZr3OBFY33Z38L8UIe1HzXWPTE8addXhUM/edit#slide=id.p) are now available. +[Slides](https://docs.google.com/presentation/d/1AWNZsRTf9aZr3OBFY33Z38L8UIe1HzXWPTE8addXhUM/edit#slide=id.p). ### Friday, January 7, 2022 at 2pm EST Special guest speaker [Dorit Kliemann](https://psychology.uiowa.edu/people/dorit-kliemann) discusses Opportunities and Challenges of a preregistration: Functional Connectivity of the Amygdala in Autism. Video Presentation: [YouTube](https://youtu.be/SFPhXM7Pt2E), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/SFPhXM7Pt2E) and -[Slides](https://drive.google.com/drive/folders/1cJmp_R7yJoDBaOUDosZ96ScCxZDEvknB) are now available. +[Slides](https://drive.google.com/drive/folders/1cJmp_R7yJoDBaOUDosZ96ScCxZDEvknB). ### Friday, December 3, 2021 at 2pm EST We welcome guest speaker [Neda Jahanshad](https://profiles.sc-ctsi.org/neda.jahanshad) from the [ENIGMA](http://enigma.ini.usc.edu/) consortium for a presentation on The Evolving Landscape of Structured Multisite Neuroimaging Analyses: Observations and Opportunities from the ENIGMA Consortium. Video Presentation: [YouTube](https://youtu.be/lnQxe44NPyk), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/lnQxe44NPyk) and -[Slides](https://docs.google.com/presentation/d/1SXKyfPNRmQMJUsp8viTywAqrXnoXSvcNBZ1TpvUKsA0/edit?usp=sharing) are now available. +[Slides](https://docs.google.com/presentation/d/1SXKyfPNRmQMJUsp8viTywAqrXnoXSvcNBZ1TpvUKsA0/edit?usp=sharing). ### Friday, November 5, 2021 at 2pm EDT Guest speaker and ReproNim-INCF Fellow [Chris Rorden](https://cstar.sc.edu/chris-rorden/) joins us, with a presentation on Advanced Neuroimaging Visualization for Cloud Computing Ecosystems. Video Presentation: [YouTube](https://www.youtube.com/watch?v=7U8NZc_SrDI), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/7U8NZc_SrDI) and -[Slides](https://docs.google.com/presentation/d/1zqGohKBFZrckVOVm1Fvj6ASXeeVoyL9k_PVg13eWcgM/edit#slide=id.gc6f9544c1_0_0) are available. +[Slides](https://docs.google.com/presentation/d/1zqGohKBFZrckVOVm1Fvj6ASXeeVoyL9k_PVg13eWcgM/edit#slide=id.gc6f9544c1_0_0). ### Friday, October 1, 2021 at 2pm EDT We kick off our fall schedule with special guest speakers [David Van Essen](https://profiles.wustl.edu/en/persons/david-van-essen) and [Matt Glasser](https://neuroscience.wustl.edu/people/matthew-glasser/) on the topic of Reproducibility in Human Neuroimaging: Lessons from the Human Connectome Project. Video Presentation: [YouTube](https://youtu.be/TBvbneQvIOI), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/TBvbneQvIOI) and -[Slides](https://docs.google.com/presentation/d/1_74sex8RuFiN389hv85Pv0eo-dpNVqCu/edit#slide=id.p1) are available. +[Slides](https://docs.google.com/presentation/d/1_74sex8RuFiN389hv85Pv0eo-dpNVqCu/edit#slide=id.p1). ### Friday, July 2, 2021 at 2pm EDT ReproNim collaborators [Michael O'Shea](https://www.med.unc.edu/childrensresearch/directory/michael-oshea-md-mph/) and the [ELGAN](https://elgan.fpg.unc.edu/) team discuss Neuroimaging Studies of Consequences of Extremely Premature Birth in partnership with our own David Kennedy for related discussion of ReproNim-enabled Diffusion Imaging Analyses @@ -320,64 +320,64 @@ Video: [YouTube](https://youtu.be/gSI_Do8OIqg), [ReproTube](https://datasets.dat Guest speaker [Kristina Rapuano](https://www.betterup.com/blog/author/dr-kristina-rapuano-phd) joins us from Yale, with a presentation on “Large-scale restriction spectrum imaging and applications to pediatric obesity.” Video: [YouTube](https://youtu.be/vC6nJWciAbI), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/vC6nJWciAbI) and -[Slides](https://drive.google.com/drive/folders/1WAXNZiylHsFncLSRRYDQ3HK7EIe7-yLb) are now available. +[Slides](https://drive.google.com/drive/folders/1WAXNZiylHsFncLSRRYDQ3HK7EIe7-yLb). ### Friday, May 7, 2021 at 2pm EDT Guest speaker [Ross Markello](https://rossmarkello.com/) joins us from McGill, with a presentation on "Investigating Variability in Biological Analyses of Brain Maps." Video: [YouTube](https://youtu.be/pMke3bzXpmc), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/pMke3bzXpmc) and -[Slides](https://drive.google.com/drive/folders/1WAXNZiylHsFncLSRRYDQ3HK7EIe7-yLb) are now available. +[Slides](https://drive.google.com/drive/folders/1WAXNZiylHsFncLSRRYDQ3HK7EIe7-yLb). ### Friday, April 2, 2021 at 2pm EDT ReproNim collaborator [Anna Manelis](https://www.linkedin.com/in/anna-manelis-12184412) and ReproNim investigator Yaroslav Halchenko consider "The interplay between depression and obesity: using the ReproNim technologies to study public health problems." Video Presentation: [YouTube](https://youtu.be/KpgF18p3Woo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/KpgF18p3Woo) and -[Slides](https://drive.google.com/drive/folders/1g8GJiMs_V545c-_Halq6c4BSam0ZiHN0) are now available. +[Slides](https://drive.google.com/drive/folders/1g8GJiMs_V545c-_Halq6c4BSam0ZiHN0). ### Friday, March 5, 2021 at 2pm EST Our own David Kennedy discusses the ReproPub, with a presentation on "IQ in Typical Development: Using ReproNim Technologies to Create a Re-executable Mega-Analysis of the Historical Literature." Video Presentation: [YouTube](https://youtu.be/RdJ_Ac1ZO8M), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/RdJ_Ac1ZO8M) and -[Slides](https://docs.google.com/presentation/d/1ewdyPyQE0ebT4FqVrpqYNE4-SKBqg9YjtXiCI6CwDO0/edit#slide=id.gbf7462d4f7_0_0) are now available. +[Slides](https://docs.google.com/presentation/d/1ewdyPyQE0ebT4FqVrpqYNE4-SKBqg9YjtXiCI6CwDO0/edit#slide=id.gbf7462d4f7_0_0). ### Friday, February 5, 2021 at 2pm EST ReproNim investigators Jeffrey Grethe, David Keator, and Albert Crowley discuss how to create and utilize local metadata storage in "How to Build Your Own ReproPond," including various aspects of setup, local installation of BlazeGraph, and usage pointers. -Video Presentation: [YouTube](https://www.youtube.com/watch?v=clIL2LJcHXY&feature=youtu.be), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/clIL2LJcHXY) and [Slides](https://docs.google.com/presentation/d/1t7WWzuokzifwqAza9zaov_KxfKDO_Dqkwa-B8O5b4QA/edit#slide=id.p) are available. +Video Presentation: [YouTube](https://www.youtube.com/watch?v=clIL2LJcHXY&feature=youtu.be), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/clIL2LJcHXY) and [Slides](https://docs.google.com/presentation/d/1t7WWzuokzifwqAza9zaov_KxfKDO_Dqkwa-B8O5b4QA/edit#slide=id.p). ### Friday, January 8, 2021 at 2pm EST ReproNim collaborator [Remi Gau](https://remi-gau.github.io/) discusses his computational approach to best practices in data analysis and sharing ([COBIDAS](https://www.humanbrainmapping.org/i4a/pages/index.cfm?pageid=3728)), combining [eCOBIDAS](https://brainhack.org/global2020/project/project_45/) with the use of ReproSchema to promote e-capture of experimental methods, in "eCOBIDAS: Because Methods Writing is Too Important (and Boring) to Let Humans Do It." -Video Presentation: [YouTube](https://www.youtube.com/watch?v=bQd-e_v2iCc&feature=youtu.be), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/bQd-e_v2iCc) and [Slides](https://docs.google.com/presentation/d/1p4TyLePa44PWzqHhkNJOoAOj1xioiXuH/edit#slide=id.p1) are now available. +Video Presentation: [YouTube](https://www.youtube.com/watch?v=bQd-e_v2iCc&feature=youtu.be), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/bQd-e_v2iCc) and [Slides](https://docs.google.com/presentation/d/1p4TyLePa44PWzqHhkNJOoAOj1xioiXuH/edit#slide=id.p1). ### Friday, December 4, 2020 at 2pm EST ReproNim investigator Yaroslav Halchenko and his team focus on "Reproducible Execution of Data Collection/Processing." Video Presentation: [YouTube](https://youtu.be/dwBtrpI2iS0), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/dwBtrpI2iS0) and -[Slides](http://datasets.datalad.org/repronim/artwork/talks/webinar-2020-reprocomp/#/) are now available. +[Slides](http://datasets.datalad.org/repronim/artwork/talks/webinar-2020-reprocomp/#/). ### Friday, November 6, 2020 at 2pm EST Special presentation! Our collaborators from the COINSTAC team, [Vince Calhoun](https://news.gsu.edu/2020/09/10/professor-vince-calhoun-named-director-of-center-for-advanced-brain-imaging/) and [Theo van Erp](https://cnlm.uci.edu/erp/) provide "An Overview of COINSTAC, with a Practical Application to Analysis." -Video Presentation: [YouTube](https://www.youtube.com/watch?v=6lpsro_L9-Y), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/6lpsro_L9-Y) and [Slide Set 1 (Calhoun)](https://drive.google.com/drive/folders/1aMkeJDOwHlb192Y-rrP7cSr8M8iatxBk) and [Slide Set 2 (van Erp)](https://docs.google.com/presentation/d/1QdiHE7L-WIFybe3X6ZXB2eDcFAMqBo2m/edit#slide=id.p1) are now available. +Video Presentation: [YouTube](https://www.youtube.com/watch?v=6lpsro_L9-Y), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/6lpsro_L9-Y) and [Slide Set 1 (Calhoun)](https://drive.google.com/drive/folders/1aMkeJDOwHlb192Y-rrP7cSr8M8iatxBk) and [Slide Set 2 (van Erp)](https://docs.google.com/presentation/d/1QdiHE7L-WIFybe3X6ZXB2eDcFAMqBo2m/edit#slide=id.p1). ### Friday, October 2, 2020 at 2pm EDT ReproNim investigators and members of the ReproNim training team, JB Poline, Peer Herholz and David Kennedy discuss "How Would ReproNim do That? An introduction to the ReproNim 'How Would' Documents." Video Presentation: [YouTube](https://youtu.be/NPlAQdSDnBk), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/NPlAQdSDnBk) and -[Slides](https://docs.google.com/presentation/d/1Csj8TSZbagubWBK6FRujSqHQisUK47niwCKLl__MepY/edit?usp=sharing) are now available. +[Slides](https://docs.google.com/presentation/d/1Csj8TSZbagubWBK6FRujSqHQisUK47niwCKLl__MepY/edit?usp=sharing). ### Friday, September 4, 2020 at 2pm EDT ReproNim investigator Jeff Grethe presents "Drowning in data? Learn how to swim in ReproNim's data ponds and lakes." Video Presentation: [YouTube](https://youtu.be/VQ5t24mrvJI), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/VQ5t24mrvJI) and -[Slides](https://docs.google.com/presentation/d/1H4C_cBU9BE9EYFNyK8YBLQObzvq9iDztLWrqRIQTmgc/edit#slide=id.p) are now available. +[Slides](https://docs.google.com/presentation/d/1H4C_cBU9BE9EYFNyK8YBLQObzvq9iDztLWrqRIQTmgc/edit#slide=id.p). ### Friday, August 7, 2020 at 2pm EDT ReproNim investigator Satra Ghosh addresses the topic of "Harmonizing clinical and behavioral data collection through ReproSchema." Video Presentation: [YouTube](https://youtu.be/dDuP-Znso5Y), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/dDuP-Znso5Y) and -[Slides](https://docs.google.com/presentation/d/1H4C_cBU9BE9EYFNyK8YBLQObzvq9iDztLWrqRIQTmgc/edit#slide=id.p) are now available. +[Slides](https://docs.google.com/presentation/d/1H4C_cBU9BE9EYFNyK8YBLQObzvq9iDztLWrqRIQTmgc/edit#slide=id.p). ### Friday, July 3, 2020 ~ no meeting ~ happy summer! @@ -385,43 +385,43 @@ Video Presentation: [YouTube](https://youtu.be/dDuP-Znso5Y), [ReproTube](https:/ ReproNim investigator Yaroslav Halchenko presents "Version control your data and computation using containers, DataLad and ReproMan, and reproducible they be!" Both the Video Presentation: [YouTube](https://youtu.be/ix3lC6HGo-Q), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/ix3lC6HGo-Q) and -[Slides](https://docs.google.com/presentation/d/1NvjpsrbDHz_9WivvYICTh2U8Xak8TFk5nyWLiCdrHAU/edit?usp=sharing) are now available +[Slides](https://docs.google.com/presentation/d/1NvjpsrbDHz_9WivvYICTh2U8Xak8TFk5nyWLiCdrHAU/edit?usp=sharing). ### Friday, May 1, 2020 at 2pm EDT Guest speaker [Franco Pestilli](https://pestillilab.github.io/team/) (Associate Professor, University of Indiana), discusses "[brainlife.io](https://brainlife.io/) A free cloud platform for secure, reproducible neuroscience data management, analysis and visualization." -Video Presentation: [YouTube](https://www.youtube.com/watch?v=5wW5Q0adRzE&feature=youtu.be), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/5wW5Q0adRzE) is now available +Video Presentation: [YouTube](https://www.youtube.com/watch?v=5wW5Q0adRzE&feature=youtu.be), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/5wW5Q0adRzE). ### Friday, April 3, 2020 at 2pm EDT ReproNim investigator David Keator introduces "Tools and Techniques for BIDS Semantic Annotation and Query Across Datasets with NIDM" Both the Video Presentation: [YouTube](https://youtu.be/egFGzdna0eo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/egFGzdna0eo), and -[Slides](https://drive.google.com/drive/u/0/folders/1avOWdtyBFWm2z3dPkvD7xxGqBq2ZdSnE) are now available +[Slides](https://drive.google.com/drive/u/0/folders/1avOWdtyBFWm2z3dPkvD7xxGqBq2ZdSnE). ### Friday, March 6, 2020 at 2pm EST ReproNim investigator JB Poline discusses "How Do I Teach or Learn Reproducible Neuroimaging?" -Both the Video Presentation: [YouTube](https://www.youtube.com/watch?v=2JJ0AqYH1iQ), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/2JJ0AqYH1iQ), and [Slides](https://docs.google.com/presentation/d/1vSrK3Du0iggi4x6NW1jUG-WsJJKIb8EnU9OeP2IpZAk/edit#slide=id.p1) are now available +Both the Video Presentation: [YouTube](https://www.youtube.com/watch?v=2JJ0AqYH1iQ), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/2JJ0AqYH1iQ), and [Slides](https://docs.google.com/presentation/d/1vSrK3Du0iggi4x6NW1jUG-WsJJKIb8EnU9OeP2IpZAk/edit#slide=id.p1). ### Friday February 7, 2020 at 2pm EST ReproNim investigator Jeff Grethe introduces [InterLex](https://scicrunch.org/nidm-terms/interlex/dashboard) in his presentation "Damn it Jim, I am a researcher not an ontologist: Exploring and using terminologies" Both the Video Presentation: [YouTube](https://youtu.be/4qcRkqkTOFk), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/4qcRkqkTOFk), and -[Slides](https://drive.google.com/open?id=1NhxbgmqT5Pd8n1SMqEhUjd5Fl6UAujOwL9am7icl61c) are available +[Slides](https://drive.google.com/open?id=1NhxbgmqT5Pd8n1SMqEhUjd5Fl6UAujOwL9am7icl61c). ### Friday, January 3, 2020 at 2pm EST ReproNim investigator Dorota Jarecka presents "Testing scientific workflows with Testkraken" Both the Video Presentation: [YouTube](https://www.youtube.com/watch?v=d5KbmuhvnwE), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/d5KbmuhvnwE) and -[Slides](https://drive.google.com/open?id=1QzcywXi1ThawyxJQLFVGG8hls9H0trOC) are available +[Slides](https://drive.google.com/open?id=1QzcywXi1ThawyxJQLFVGG8hls9H0trOC). ### Friday, December 6, at 2pm EST ReproNim investigator Yaroslav Halchenko and colleagues present "Taking Control of your DICOM Data: ReproIn/HeuDiConv Tools" Both the Video Presentation: [YouTube](https://www.youtube.com/watch?v=j2SKX37-w4c&list=PLs3CA4ShM1DUX0nTMKfoB8Z6kdrZpByLa&index=5&t=0s), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/j2SKX37-w4c) and -[Slides](https://docs.google.com/presentation/d/14UNWQVY49c9Xc-7sj1FkoILXnt-wYjW404oqT-FtCW8/edit#slide=id.p) are available +[Slides](https://docs.google.com/presentation/d/14UNWQVY49c9Xc-7sj1FkoILXnt-wYjW404oqT-FtCW8/edit#slide=id.p). ### Friday, November 1, at 2pm EDT Our own David Kennedy presents "State of the ReproNim: A High-Level Overview to Reproducibility in Neuroimaging Research" -Both the Video Presentation: [YouTube](https://www.youtube.com/watch?v=CS_SP7iYuns&feature=youtu.be), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/CS_SP7iYuns) and [Slides](https://drive.google.com/open?id=1ziznB86woaRhNLLYaqanuySqssNqhe4ZsyXcD5Rb5HM) are available +Both the Video Presentation: [YouTube](https://www.youtube.com/watch?v=CS_SP7iYuns&feature=youtu.be), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/CS_SP7iYuns) and [Slides](https://drive.google.com/open?id=1ziznB86woaRhNLLYaqanuySqssNqhe4ZsyXcD5Rb5HM). From 40e3c63aa540ac7ceae708f037b7d32ff8f3f046 Mon Sep 17 00:00:00 2001 From: Yaroslav Halchenko Date: Tue, 4 Aug 2026 16:55:30 -0400 Subject: [PATCH 4/5] webinars: reformat June 5 entry to branch's YouTube+ReproTube+Slides style Post-merge cleanup for the Hugh Garavan entry brought in from juliebates-patch-29: converts `[Video Presentation](...) and [Slides](...) are now available.` to the branch convention `Video Presentation: [YouTube](...), [ReproTube](...) and [Slides](...).` and drops the extra blank lines after the summer hiatus notice. The ReproTube link for fJZ9cBuUePo does not resolve yet -- the ReproTube sync only covers through May 2026 -- but will start working after the next sync. Co-Authored-By: Claude Code 2.1.220 / Claude Opus 4.7 (1M context) --- content/about/webinars.md | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/content/about/webinars.md b/content/about/webinars.md index 1ab3d73..2910cd9 100644 --- a/content/about/webinars.md +++ b/content/about/webinars.md @@ -20,8 +20,6 @@ Browse our complete collection of ReproNim webinars via: ReproNim's 'First Fridays' monthly webinars will resume on Friday, October 2, for the 2026-2027 season. - - ## Webinar presentations to date ### Friday, June 5, 2026 at 2pm ET @@ -30,7 +28,7 @@ ReproNim's 'First Fridays' monthly webinars will resume on Friday, October 2, fo Presentation Title: “Capturing individual differences in ABCD: Insights into task fMRI and cannabis use.” -[Video Presentation](https://youtu.be/fJZ9cBuUePo) and [Slides](https://drive.google.com/drive/folders/1j7DE03ZctL2-081Ym3J9ybchstJ_Q3Xs) are now available. +Video Presentation: [YouTube](https://youtu.be/fJZ9cBuUePo), [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/video/fJZ9cBuUePo) and [Slides](https://drive.google.com/drive/folders/1j7DE03ZctL2-081Ym3J9ybchstJ_Q3Xs). ### Friday, May 1, 2026 at 2pm ET From 4c329fe4f130251752ad599f092d9b6b294804a7 Mon Sep 17 00:00:00 2001 From: Yaroslav Halchenko Date: Thu, 6 Aug 2026 14:05:17 -0400 Subject: [PATCH 5/5] Apply suggestion from @yarikoptic --- content/about/webinars.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/content/about/webinars.md b/content/about/webinars.md index 2910cd9..5f90d73 100644 --- a/content/about/webinars.md +++ b/content/about/webinars.md @@ -9,7 +9,7 @@ The ReproNim webinar series introduces important efforts in reproducibility feat Browse our complete collection of ReproNim webinars via: -- [YouTube channel](https://www.youtube.com/channel/UCGX2sXmEgDuUGWHDSiT1NdQ/videos) — original videos. +- [YouTube playlist](https://www.youtube.com/channel/UCGX2sXmEgDuUGWHDSiT1NdQ/videos) — original videos. - [Slides](https://drive.google.com/drive/folders/1xqgWtghspJtxa8hmC4d6_zUPCgpe4fp-) — Google Drive folder. - [ReproTube](https://datasets.datalad.org/repronim/ReproTube/ReproNim/web/#/?playlists=PLs3CA4ShM1DUX0nTMKfoB8Z6kdrZpByLa) — offline backup of the ReproNim webinar playlist, with full-text caption search, built with [annextube](https://github.com/con/annextube).